DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and LOC1269887

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_308541.5 Gene:LOC1269887 / 1269887 VectorBaseID:AGAMI1_008279 Length:313 Species:Anopheles gambiae


Alignment Length:257 Identity:72/257 - (28%)
Similarity:114/257 - (44%) Gaps:44/257 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PSERIIGGSSMDITDVPWQ-VSLQYYGEH--FCGGSIYSKTIIITAAHCIKEGERSIRAGSSLHD 87
            ||.||..|....:...|:| :.|..:|..  .|||::.:...|:|||||:...:.:...|     
Mosquito    63 PSGRITNGLEARVGQFPYQALLLTEFGMFTIMCGGTVLTPNFILTAAHCVMLDQTTKATG----- 122

  Fly    88 SGGVVVG-----------------VEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIPL-A 134
             |..::|                 ....|:||.:...|...|||:::|::||.|:..:|.:.| |
Mosquito   123 -GMAILGAHNRMVMEPTQQRIRFATSGIIVHPSYTATNFRFDVAMVRLNAPLRFNSYVQPVRLPA 186

  Fly   135 ETDPPTSSSALAT--GWGRGNFL--IRPRQLQGVEILIRPLIVCKLKYGNGVFN-EDIC-AGRMG 193
            .||.......:.|  |:||.|..  |.|..|:.....|.....|..::|:.:.. .:|| :|..|
Mosquito   187 RTDQRLFDGIIGTVSGFGRTNDKDGILPSILRYTINTILSNGACAARWGSMLVEPHNICLSGDGG 251

  Fly   194 KGGCYGDSGGPLVFNGQLVGITSRTGNIVCLGS---------SLYASVARYRNWILSAIDVL 246
            :..|.|||||||... :..|||.:.| :...||         ::|..|:.:.:||.:..|.|
Mosquito   252 RSACVGDSGGPLTIE-EWGGITYQVG-VTSFGSGNGCTDGMPTVYGRVSYFLDWIRANSDCL 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 66/245 (27%)
LOC1269887XP_308541.5 None

Return to query results.
Submit another query.