DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and XB5892359

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_031752073.1 Gene:XB5892359 / 100497443 XenbaseID:XB-GENE-5892360 Length:426 Species:Xenopus tropicalis


Alignment Length:255 Identity:76/255 - (29%)
Similarity:115/255 - (45%) Gaps:53/255 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RIIGGSSMDITDVPWQVSLQ-----YYGEHFCGGSIYSKTIIITAAHCI--KEGERSIRAGSSLH 86
            |:|.|::......||.||:|     .| .|.|||::.:...::|||||:  .:.|:|:       
 Frog    22 RVIDGANAQPGSWPWIVSIQMPIDSVY-RHVCGGTVLNHHWVMTAAHCLLKYQSEQSL------- 78

  Fly    87 DSGGVVVG---------------VEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQ--TIPLA 134
              ..:|.|               ::..|.|..|:|...:||:|::.|..|::|||.||  .:|..
 Frog    79 --ARIVFGLFNVSDLGPETQIRKIKEMIRHEHFNKKENKNDIALIYLDRPVAFSDYIQPACLPQQ 141

  Fly   135 ETDPPTSSSALATGWGRGN--FLIRPRQLQGVEI-LIRPLIVCKLKYGNGVFNE-DICAG--RMG 193
            .:|....:.....|||..:  |.||...||..:. ||......:..:.||...| ::|||  ..|
 Frog   142 SSDITRMNDCYIAGWGLVDDYFRIRTDVLQEAKTELIANSRCNQSDWYNGRIKEYNLCAGFEHGG 206

  Fly   194 KGGCYGDSGGPLVFNGQ------LVGITSRTGNIVCLGSS----LYASVARYRNWILSAI 243
            ...|.|||||||:....      :|||.|..|  :| |.|    :|.:...::.|||..|
 Frog   207 PDTCDGDSGGPLMCKRMKAKTYYIVGIASWGG--LC-GHSYRNGVYTATQYFKEWILDKI 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 72/249 (29%)
XB5892359XP_031752073.1 Tryp_SPc 22..259 CDD:214473 72/249 (29%)

Return to query results.
Submit another query.