DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and f12

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_017947702.2 Gene:f12 / 100493769 XenbaseID:XB-GENE-1004811 Length:597 Species:Xenopus tropicalis


Alignment Length:253 Identity:74/253 - (29%)
Similarity:112/253 - (44%) Gaps:52/253 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCIKEGER----SIRAGSS---LH 86
            ||:||........|:..:| |...||||||:.|...|:|||||:.:...    |:..|.|   ..
 Frog   358 RIVGGLVALPASHPYIAAL-YIDNHFCGGSLISPCWIVTAAHCLDQRPNVTKISVVLGQSRFNTT 421

  Fly    87 DSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSS-----PLSFSDSIQTIPLAETDPPTSSS--A 144
            |...|.:.||.||:|.::....:::|:|::|:.|     ...||..:|.|.|.:......|:  .
 Frog   422 DQHTVTLLVEKYILHEKYYGDTLQHDIALVKVKSINGLCASEFSQFVQPICLPQQFKMAESTKQC 486

  Fly   145 LATGWGRGNFLIRPRQLQGVE----------ILIRPLIVCKLK--YGNGVFNEDICAGRM--GKG 195
            :..|||        .|.:|.|          :.|.|...|:..  :|:.:....:|||.|  |..
 Frog   487 VVAGWG--------HQYEGAEHYAFFLQEASMPIIPYTQCQSPSVHGDRMLPGMLCAGFMEGGVD 543

  Fly   196 GCYGDSGGPLV--FNGQLVGITSRTGNIVCLGS--------SLYASVARYRNWILSAI 243
            .|.||||||||  .:|::     ....:|..||        .:|.:|..|.:||.:.|
 Frog   544 ACQGDSGGPLVCEVDGRI-----ELHGVVSWGSGCAEENKPGVYTAVTSYTDWIRANI 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 71/247 (29%)
f12XP_017947702.2 FN2 40..87 CDD:238019
EGF_CA 95..129 CDD:238011
KR 213..298 CDD:214527
Tryp_SPc 359..595 CDD:238113 72/249 (29%)
Blue background indicates that the domain is not in the aligned region.

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