DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and LOC100490788

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001333500.1 Gene:LOC100490788 / 100490788 XenbaseID:XB-GENE-29080351 Length:249 Species:Xenopus tropicalis


Alignment Length:251 Identity:78/251 - (31%)
Similarity:122/251 - (48%) Gaps:31/251 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLAVHLLISPVVPVLLEPSERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCI 72
            |.:.:.|.::...|  |:..::|:||........||||...:.|.::||||:.|...||:||||.
 Frog     4 LWVLMFLAVAAAAP--LDDDDKIVGGYECTPHSQPWQVFFTFNGRNWCGGSLISPRWIISAAHCY 66

  Fly    73 KE--------GERSI--RAGSSLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDS 127
            :.        ||..:  :.|:..|      :.|||...|..:.....::|:.::||:.|..::..
 Frog    67 QPPKTLVALLGEHDLKKKEGTEQH------IQVEAAYKHFGYKDEAYDHDIMLVKLAKPAQYNQY 125

  Fly   128 IQTIPLAETDPPTSSSALATGWGRGNFL---IR-PRQLQGVEILIRPLIVCKLKYGNGVFNEDIC 188
            :|.||:|.:.|...:..|.:|:  ||.|   || |.|||.:::.|.....||..|...:.....|
 Frog   126 VQPIPVARSCPTDGAKCLVSGY--GNLLAYNIRYPDQLQCLDLPILSDSSCKASYPRQISENMFC 188

  Fly   189 AGRM--GKGGCYGDSGGPLVFNGQLVGITSRTGNIVCL---GSSLYASVARYRNWI 239
            ||.:  .|..|.|||||||:.:|:|.|:.|  ....|.   ...:||.|..|.:||
 Frog   189 AGFLEGEKDSCQGDSGGPLICSGELYGVVS--WGRYCARKNAPGVYAKVCNYLDWI 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 72/228 (32%)
LOC100490788NP_001333500.1 Tryp_SPc 24..245 CDD:238113 74/229 (32%)

Return to query results.
Submit another query.