DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and LOC100485189

DIOPT Version :9

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_002941065.2 Gene:LOC100485189 / 100485189 -ID:- Length:249 Species:Xenopus tropicalis


Alignment Length:244 Identity:81/244 - (33%)
Similarity:112/244 - (45%) Gaps:47/244 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHC------IKEGERSIRAGSSLH 86
            :|||||:.......||..||.|:.:|.|||.:..:..::|||||      ::.||.::       
 Frog    20 DRIIGGTECRPNSQPWHCSLYYFDQHVCGGVLIDENWVLTAAHCQLSSLQVRLGEHNL------- 77

  Fly    87 DSGGVVVGVEAYII------HPQFDKHNMENDVAVLKLSSPLSFSDSIQTIPLAETDPPTSSSAL 145
               .|..|.|.:..      |..|:....:||:.:|||.||::.:|.:|||||.........:.|
 Frog    78 ---AVYEGKEQFSYAEKMCPHSGFNPITFDNDIMLLKLVSPVTINDYVQTIPLGCPTVGDGETCL 139

  Fly   146 ATGWG-----RGNFLIRPRQLQGVEILIRPLIVCKLKYGNGVFNED------ICAGRM--GKGGC 197
            .:|||     ...|   |.:||.||:.     .....|..|.|..|      :|||.|  ||..|
 Frog   140 VSGWGTTTSPEETF---PDELQCVEVQ-----TVSQDYCQGAFPTDEITDNMLCAGVMEGGKDSC 196

  Fly   198 YGDSGGPLVFNGQLVGITSRTGNIVCLGSS---LYASVARYRNWILSAI 243
            .||||||||.|..:.|||| .||..|..::   :|..:..|..||...|
 Frog   197 QGDSGGPLVCNSMVHGITS-WGNTPCGVANKPGIYTKICNYIAWIQDTI 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 78/237 (33%)
Tryp_SPc 30..239 CDD:238113 77/236 (33%)
LOC100485189XP_002941065.2 Tryp_SPc 22..243 CDD:238113 79/239 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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