DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and zgc:171509

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001307362.1 Gene:zgc:171509 / 100141339 ZFINID:ZDB-GENE-080219-48 Length:240 Species:Danio rerio


Alignment Length:251 Identity:82/251 - (32%)
Similarity:115/251 - (45%) Gaps:30/251 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFSKCFHLLLAVHLLISPVVPVLLEPSERIIGGSSMDITDVPWQVSL-QYYGEHFCGGSIYSKTI 64
            |.|..|.||:.|         |:....::||||........|||..| ..||  .||||:..::.
Zfish     1 MNSIVFILLIGV---------VVHSKGDKIIGGHECQPHSQPWQARLDDGYG--LCGGSLIHESW 54

  Fly    65 IITAAHCIKEGERSIRAGSSLHD-----SGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSF 124
            :::|||| |.....:..|.  ||     .....:..|..|.||:::.....||:.::||..|...
Zfish    55 VVSAAHC-KSSSIIVHLGK--HDLFVVEDTAQEIQAEKVISHPKYNNREHNNDIMLIKLREPAVI 116

  Fly   125 SDSIQTIPLAETDPPTSSSALATGWG-RGNFLIRPRQLQGVEILIRPLIVCKLKYGNGVFNEDIC 188
            :::::.:||...........|.:||| .|:.:  ...||.:|:.|.....||..||..:..:..|
Zfish   117 NNNVKPVPLPTNCSHAGEQCLVSGWGVTGDSI--SSTLQCLELPILSKADCKSAYGRVITKKMFC 179

  Fly   189 AGRM--GKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLG---SSLYASVARYRNWI 239
            ||.|  ||..|.||||||:|.||.|.||.|  ..|.|..   ..:|..|.||.|||
Zfish   180 AGFMDGGKDSCQGDSGGPVVCNGTLKGIVS--FGIGCAEPGFPGVYVEVCRYINWI 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 73/221 (33%)
zgc:171509NP_001307362.1 Tryp_SPc 21..234 CDD:238113 75/222 (34%)

Return to query results.
Submit another query.