DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser12 and Plg

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_445943.1 Gene:Plg / 85253 RGDID:619893 Length:812 Species:Rattus norvegicus


Alignment Length:272 Identity:83/272 - (30%)
Similarity:124/272 - (45%) Gaps:66/272 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LVASVTLISAG-------SSPERIVGGHPVLISEVPWQAAL--MYSEKYICGAVIYSDKIIITAA 63
            |.||::....|       ..|.|:|||........|||.:|  .:|.::.||..:.|.:.::|||
  Rat   559 LCASLSSFECGKPQVEPKKCPGRVVGGCVANPHSWPWQISLRTRFSGQHFCGGTLISPEWVLTAA 623

  Fly    64 HCVE---RPFDTLYSVRVGSVWKN-LGGQHARVAV---IRKHEDYVSSTILFNDIAVIRLVDTLI 121
            ||:|   ||  ..|.|.:|:..:. ||....::||   :.:..|        .|||:::|     
  Rat   624 HCLEKSSRP--EFYKVILGAHEERILGSDVQQIAVTKLVLEPND--------ADIALLKL----- 673

  Fly   122 FNAEVRPIQLADSA-PAA----------GTEASVSGWGEIGILWLQPT----SLLKTSVKILDPN 171
                .||..:.|:. ||.          .|...::||||     .:.|    .|.:..:.:::..
  Rat   674 ----SRPATITDNVIPACLPSPNYVVADRTLCYITGWGE-----TKGTPGAGRLKEAQLPVIENK 729

  Fly   172 VCKRSYQY----ITKTMICAAALLK--DSCHGDSGGPLVSGGQ----LVGIVSYGIGCANPFFPG 226
            ||.|: :|    :..|.:||..|..  |||.||||||||...:    |.|:.|:|:|||.|..||
  Rat   730 VCNRA-EYLNNRVKSTELCAGHLAGGIDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPG 793

  Fly   227 VYANVAELKPWI 238
            ||..|:....||
  Rat   794 VYVRVSRYVNWI 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 76/248 (31%)
PlgNP_445943.1 PAN_AP_HGF 33..97 CDD:238532
KR 101..183 CDD:214527
KR 183..262 CDD:214527
KR 273..354 CDD:214527
KR 374..456 CDD:214527
KR 480..562 CDD:214527 1/2 (50%)
Tryp_SPc 582..807 CDD:238113 77/249 (31%)
Blue background indicates that the domain is not in the aligned region.

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