DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser12 and TMPRSS2

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001128571.1 Gene:TMPRSS2 / 7113 HGNCID:11876 Length:529 Species:Homo sapiens


Alignment Length:258 Identity:94/258 - (36%)
Similarity:126/258 - (48%) Gaps:37/258 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VASVTLISAG-----SSPERIVGGHPVLISEVPWQAALMYSEKYICGAVIYSDKIIITAAHCVER 68
            |.|:..|:.|     |...|||||...|....|||.:|.....::||..|.:.:.|:|||||||:
Human   273 VVSLRCIACGVNLNSSRQSRIVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEK 337

  Fly    69 PFD-----TLYS--VRVGSVWKNLGGQHARVAVIRKHEDYVSSTILFNDIAVIRLVDTLIFNAEV 126
            |.:     |.::  :|...::...|.|   |..:..|.:|.|.| ..||||:::|...|.||..|
Human   338 PLNNPWHWTAFAGILRQSFMFYGAGYQ---VEKVISHPNYDSKT-KNNDIALMKLQKPLTFNDLV 398

  Fly   127 RPIQLADSAPAAGTE--ASVSGWG---EIGILWLQPTSLLKTSVKIL--DPNVCKRSYQY---IT 181
            :|:.|.:.......|  ..:||||   |.|     .||.:..:.|:|  :...|...|.|   ||
Human   399 KPVCLPNPGMMLQPEQLCWISGWGATEEKG-----KTSEVLNAAKVLLIETQRCNSRYVYDNLIT 458

  Fly   182 KTMICAAALL--KDSCHGDSGGPLVSGGQ----LVGIVSYGIGCANPFFPGVYANVAELKPWI 238
            ..||||..|.  .|||.||||||||:...    |:|..|:|.|||..:.||||.||.....||
Human   459 PAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWI 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 87/237 (37%)
TMPRSS2NP_001128571.1 LDLa 150..185 CDD:238060
SRCR_2 190..283 CDD:464747 3/9 (33%)
Tryp_SPc 293..524 CDD:238113 88/238 (37%)
Blue background indicates that the domain is not in the aligned region.

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