DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser12 and Prss55

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001419989.1 Gene:Prss55 / 683415 RGDID:1586875 Length:321 Species:Rattus norvegicus


Alignment Length:262 Identity:82/262 - (31%)
Similarity:129/262 - (49%) Gaps:25/262 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLHWLVLVASVTL---ISAGSSP--------ERIVGGHPVLISEVPWQAALMYSEKYICGAVIY 54
            |:|..::|:...||   :..|..|        .||:||....:.|.|||.::..::.:.||..|.
  Rat     1 MILPSILLLVVHTLEANVECGVRPLYDSRIGHSRIIGGQEAEVGEFPWQVSIQENDHHFCGGSIL 65

  Fly    55 SDKIIITAAHCV--ERPFDTLYSVRVGSVWKNLGGQHARVAVIRKHEDYVSSTILFNDIAVIRLV 117
            |:..|:|.|||.  :....|..:||||:..........:|..|.:|:|:...: :.||||::.|.
  Rat    66 SEWWILTVAHCFYSQELSPTELTVRVGTNDLTTSPMELQVTNIIRHKDFKRHS-MDNDIALLLLA 129

  Fly   118 DTLIFNAEVRPIQL-ADSAPAAGTEASVSGWGEIGILWLQPTS--LLKTSVKILDPNVCKRSYQY 179
            :.|.||.:..||.: ....|.:..|..|:|||.......:..:  |:|..::|.|...|.:.:..
  Rat   130 NPLTFNEQTVPICMPLQPTPPSWQECWVAGWGTTNSADKESMNMDLMKVPMRITDWKECLQLFPS 194

  Fly   180 ITKTMICAAALLK--DSCHGDSGGPLV----SGGQ--LVGIVSYGIGCANPFFPGVYANVAELKP 236
            :|..|:||:...:  |:|.||||||||    |.|:  .|||:|:|..|.....||:|..:|....
  Rat   195 LTTNMLCASYGNESFDACQGDSGGPLVCNQESDGRWYQVGIISWGKSCGQKGSPGIYTVLANYIL 259

  Fly   237 WI 238
            ||
  Rat   260 WI 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 73/227 (32%)
Prss55NP_001419989.1 Tryp_SPc 35..264 CDD:238113 74/228 (32%)

Return to query results.
Submit another query.