DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser12 and Tmprss11d

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:238 Identity:79/238 - (33%)
Similarity:110/238 - (46%) Gaps:27/238 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SPERIVGGHPVLISEVPWQAALMYSEKYICGAVIYSDKIIITAAHC---VERPFDTLYSVRVGSV 81
            |.|||:||......:.|||.:|..:..:.||..:.|:..::|||||   ...|.....:..|.::
  Rat   182 SEERIIGGTQAETGDWPWQVSLQLNNVHHCGGTLISNLWVLTAAHCFRSYSNPQQWTATFGVSTI 246

  Fly    82 WKNLGGQHARVAVIRKHEDYVSSTILFNDIAVIRLVDTLIFNAEVRPIQLADSAPAA------GT 140
            ...|   ..||..|..|.:|.|.| ..|||||::|...:.|...:..:.|    |||      .:
  Rat   247 SPRL---RVRVRAILAHAEYNSIT-RDNDIAVVQLDRPVTFTRNIHRVCL----PAATQNIIPDS 303

  Fly   141 EASVSGWGEIGILWLQPTSLLKTSVKILDPNVCKRSYQY---ITKTMICAAAL--LKDSCHGDSG 200
            .|.|:|||.:.......|:|.:..|:|:...||.....|   :...|:||...  ..|:|.||||
  Rat   304 VAYVTGWGSLTYGGNTVTNLQQGEVRIVSSEVCNEPAGYGGSVLPGMLCAGVRSGAVDACQGDSG 368

  Fly   201 GPLVSGGQ-----LVGIVSYGIGCANPFFPGVYANVAELKPWI 238
            ||||....     :|||||:|..|..|..||||..|...:.||
  Rat   369 GPLVQEDTRRLWFVVGIVSWGYQCGLPNKPGVYTRVTAYRNWI 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 75/233 (32%)
Tmprss11dNP_001028824.2 SEA 48..140 CDD:460188
Tryp_SPc 186..414 CDD:238113 76/234 (32%)
Blue background indicates that the domain is not in the aligned region.

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