DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser12 and cfd

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001018368.1 Gene:cfd / 553553 ZFINID:ZDB-GENE-050522-411 Length:249 Species:Danio rerio


Alignment Length:240 Identity:73/240 - (30%)
Similarity:122/240 - (50%) Gaps:16/240 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SVTLISAGSSPERIVGGHPVLISEVPWQAALMYSEKYICGAVIYSDKIIITAAHCVERPFDTLYS 75
            ||...:|..:.:.|.||........|:.|::.::.|:.||..:.|.:.:::||||.:....:...
Zfish     8 SVLFYAAFHTGDCITGGQEAKAHSRPYMASVQWNGKHECGGFLISSQWVMSAAHCFQDGRTSGVK 72

  Fly    76 VRVGSVWKNLGG----QHARVAVIRKHEDYVSSTILFNDIAVIRLVDTLIFNAEVRPIQLADSAP 136
            |.:|:  .:|.|    :....|.:..|.|: |.:...||||:|:|...:..:..|:|::......
Zfish    73 VVLGA--HSLSGAEDTKQTFDAEVYNHPDF-SISNYDNDIALIKLDKPVTQSDAVKPVKFQRDET 134

  Fly   137 AAGTEASV---SGWGEIGILWLQPTSLLKTSVKILDPNVCKRSYQY---ITKTMICAAALLKDSC 195
            |...||:|   :|||.:..:..:|..|.:.|:.:::...|.|:..|   .|..|:|||...||:|
Zfish   135 ADPKEAAVVETAGWGSLNNMGGRPDKLHELSIPVMERWRCGRADFYGEKFTSNMLCAADKRKDTC 199

  Fly   196 HGDSGGPLVSGGQLVGIVSYGIG--CANPFFPGVYANVAELKPWI 238
            .|||||||:..|.:|||.|.| |  |.:...||:|..::....||
Zfish   200 DGDSGGPLLYRGIVVGITSNG-GKKCGSSRKPGLYTIISHYASWI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 68/226 (30%)
cfdNP_001018368.1 Tryp_SPc 21..246 CDD:238113 70/227 (31%)

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