DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser12 and Tpsab1

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_062195.2 Gene:Tpsab1 / 54271 RGDID:3066 Length:310 Species:Rattus norvegicus


Alignment Length:266 Identity:80/266 - (30%)
Similarity:120/266 - (45%) Gaps:32/266 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLHWLVLVASVTLISAGSS----PERIVGGHPVLISEVPWQAALMYSEKY---ICGAVIYSDKI 58
            :||..|.|::|  |:.|..|    .|.||||.....::.|||.:|..::.|   .||..:...:.
  Rat    41 LLLLTLPLLSS--LVHAAPSLAMPREGIVGGQEASGNKWPWQVSLRVNDTYWMHFCGGSLIHPQW 103

  Fly    59 IITAAHCV--ERPFDTLYSVRVGSVWKNLGGQHARVAVIRKHED-YVSSTILFNDIAVIRLVDTL 120
            ::||||||  .:.......|::...:.........|:.|..|.| |::..  ..|||:::|.:.:
  Rat   104 VLTAAHCVGPNKADPNKLRVQLRKQYLYYHDHLLTVSQIISHPDFYIAQD--GADIALLKLTNPV 166

  Fly   121 IFNAEVRPIQL--ADSAPAAGTEASVSGWGEIG--ILWLQPTSLLKTSVKILDPNVCKRSY---- 177
            ...:.|..:.|  |.....:||...|:|||.|.  :....|..|.:..|.|::..:|...|    
  Rat   167 NITSNVHTVSLPPASETFPSGTLCWVTGWGNINNDVSLPPPFPLEEVQVPIVENRLCDLKYHKGL 231

  Fly   178 ------QYITKTMICAAALLKDSCHGDSGGPLVSGGQ----LVGIVSYGIGCANPFFPGVYANVA 232
                  ..:...|:||.....|||.||||||||...:    ..|:||:|.|||.|..||:|..|.
  Rat   232 NTGDNVHIVRDDMLCAGNEGHDSCQGDSGGPLVCKVEDTWLQAGVVSWGEGCAQPNRPGIYTRVT 296

  Fly   233 ELKPWI 238
            ....||
  Rat   297 YYLDWI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 69/238 (29%)
Tpsab1NP_062195.2 Tryp_SPc 66..302 CDD:238113 69/237 (29%)

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