DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser12 and XB5758585

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001011293.1 Gene:XB5758585 / 496746 XenbaseID:XB-GENE-5758586 Length:248 Species:Xenopus tropicalis


Alignment Length:247 Identity:74/247 - (29%)
Similarity:115/247 - (46%) Gaps:14/247 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WLVLVASVTLISAGSSP---ERIVGGHPVLISEVPWQAALMYSEKYICGAVIYSDKIIITAAHCV 66
            |::|...|    ..:||   ::|:|.:........||....|.....||..:.|.:.||:||.|.
 Frog     4 WVLLFLGV----VAASPLVDDKIIGEYECAPHSQKWQVYFTYKGYPWCGGSLISSRWIISAASCN 64

  Fly    67 ERPFDTLYSVRVGSVWKNLG-GQHARVAVIRKHEDYVSSTILFNDIAVIRLVDTLIFNAEVRPIQ 130
            :.|...:..:....:.:..| .||.:|.....|..|:..:. .|:|.:::|.:...||..|:||:
 Frog    65 QSPKYLIAHLGKHDITREEGTEQHIQVEKTFPHNRYLGLSD-SNNIMLVKLAEPAQFNQFVQPIK 128

  Fly   131 LADSAPAAGTEASVSGWGEI-GILWLQPTSLLKTSVKILDPNVCKR--SYQYITKTMICA--AAL 190
            :|.|.|..|....|||:|.: ......|..|....:.||..:.|..  |.:.:...::||  |..
 Frog   129 VASSCPREGKVCQVSGFGNLNSYAEKYPDRLQCLDLPILPESSCDAYFSPKKMHTNLMCAGFAQD 193

  Fly   191 LKDSCHGDSGGPLVSGGQLVGIVSYGIGCANPFFPGVYANVAELKPWILNAI 242
            .||||.||:||||:..|:|.||:.:|..|:....||||..|.....|:.|.|
 Frog   194 DKDSCQGDAGGPLICKGELYGIILWGNECSGRGIPGVYLKVCNFTNWMQNII 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 66/220 (30%)
XB5758585NP_001011293.1 Tryp_SPc 22..244 CDD:238113 67/222 (30%)

Return to query results.
Submit another query.