DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser12 and LOC496623

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001011199.1 Gene:LOC496623 / 496623 XenbaseID:XB-GENE-29098963 Length:243 Species:Xenopus tropicalis


Alignment Length:254 Identity:82/254 - (32%)
Similarity:119/254 - (46%) Gaps:33/254 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVLVASVTLISAGSSPERIVGGHPVLISEVPWQAALMYSEKYICGAVIYSDKIIITAAHCVERPF 70
            |.|:..:...:|....::|:||.....:.||:..:| .|..:.||..:.:::.:::||||    :
 Frog     3 LFLLCVLLGAAAAFDDDKIIGGATCAKNSVPYIVSL-NSGYHFCGGSLINNQWVVSAAHC----Y 62

  Fly    71 DTLYSVRVGSVWKNLGGQHARVAVIRKHEDYVSST-----------ILFNDIAVIRLVDTLIFNA 124
            .....||:        |:| .:|:....|.::||:           .|.|||.:|:|......||
 Frog    63 KASIQVRL--------GEH-NIALSEGTEQFISSSKVIRHSGYNSWTLDNDIMLIKLSSAASLNA 118

  Fly   125 EVRPIQLADSAPAAGTEASVSGWGEI---GILWLQPTSLLKTSVKILDPNVCKRSYQ-YITKTMI 185
            .|..:.|.....|||....:||||..   |..:  |..|......||....|..:|. .||..||
 Frog   119 AVNAVALPSGCAAAGASCLISGWGNTLSSGSNY--PDLLQCLYAPILTDAQCNNAYPGEITNNMI 181

  Fly   186 CAAALL--KDSCHGDSGGPLVSGGQLVGIVSYGIGCANPFFPGVYANVAELKPWILNAI 242
            |...|.  ||||.||||||:|..|:|.|:||:|.|||...:||||..|.....||.:.|
 Frog   182 CLGFLEGGKDSCQGDSGGPVVCNGELQGVVSWGYGCAQRNYPGVYTKVCNYNSWIQSTI 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 76/231 (33%)
LOC496623NP_001011199.1 Tryp_SPc 21..239 CDD:238113 78/233 (33%)

Return to query results.
Submit another query.