DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser12 and prtn3

DIOPT Version :9

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001006847.1 Gene:prtn3 / 448597 XenbaseID:XB-GENE-5805214 Length:245 Species:Xenopus tropicalis


Alignment Length:250 Identity:71/250 - (28%)
Similarity:123/250 - (49%) Gaps:20/250 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 HWLVLVASV---TLISAGSSPERIVGGHPVLISEVPWQAALMYSEKYICGAVIYSDKIIITAAHC 65
            |.|::..|:   :.::.||...:||||.....:..|:.|:|....::.||..:.:.:.::|||||
 Frog     3 HHLLVTLSILWASQVNGGSMHTQIVGGREATPNSHPYIASLQLRGRHFCGGSLIAPQFLMTAAHC 67

  Fly    66 VERPFDTLYSVRVGSVWKNLGGQHA---RVAVIRKHEDYVSSTILFNDIAVIRLVDTLIFNAEVR 127
            :|.....|.:|.:|:  .:|....|   |..|.:..|:..:...|.|||.:::|...:..|.:|:
 Frog    68 MENTASNLVTVVLGA--HSLRANEATKQRFRVNQVFENGFNPLTLQNDIVILKLDRPVSLNGKVQ 130

  Fly   128 PIQL--ADSAPAAGTEASVSGWGEIGILWLQPTSLLKTSVKILDPNVCKRSYQYITKTMICAAAL 190
            .:.|  |:....|||:...:|||.:......|..|.:.:|.:...|:|:       ...||....
 Frog   131 VVSLPSANEDVPAGTQCVTAGWGRLSTEGQIPDRLQELNVTVTRQNLCR-------PNNICTGVF 188

  Fly   191 LKDS--CHGDSGGPLVSGGQLVGIVSYGI-GCANPFFPGVYANVAELKPWILNAI 242
            ::.:  |.||||||||..|.:.||.|:.| .|.|...|..::.|:..:.:|.:||
 Frog   189 MQQAGICFGDSGGPLVCNGVIQGITSFIIRSCGNGVTPDFFSRVSLFRRFIDDAI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 63/222 (28%)
Tryp_SPc 24..238 CDD:238113 63/221 (29%)
prtn3NP_001006847.1 Tryp_SPc 26..241 CDD:238113 64/223 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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