DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser12 and CG5246

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster


Alignment Length:268 Identity:79/268 - (29%)
Similarity:131/268 - (48%) Gaps:35/268 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVLVASVTLISAGSS-------------------PE-RIVGGHPVLISEVPWQAALMYS-EKYIC 49
            |||::.:.::|..|:                   || |::||........|:|.::|.: .:::|
  Fly     4 LVLISVLVILSQCSAKSVKIHRRHQLNHHLGHVKPETRVIGGVDSPTGFAPYQVSIMNTFGEHVC 68

  Fly    50 GAVIYSDKIIITAAHCVERPFDTLYSVRVGSVWKNLGGQHARVAVIRKHEDYVSSTILFNDIAVI 114
            |..|.:.:.|:|||||:|.|...| .:..|:|.....|....|...:.|..: ......||||:|
  Fly    69 GGSIIAPQWILTAAHCMEWPIQYL-KIVTGTVDYTRPGAEYLVDGSKIHCSH-DKPAYHNDIALI 131

  Fly   115 RLVDTLIFNAEVRPIQLAD--SAPAAGTEASVSGWGEIGILWLQPTSLLKTSVKILDPNVCK--- 174
            .....::::...:||:||.  |.|..|.:.:::|||.........|.|.|..:..:|.:.|:   
  Fly   132 HTAKPIVYDDLTQPIKLASKGSLPKVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSRV 196

  Fly   175 RSYQYITKTMICAAALL-KDSCHGDSGGPLVSGGQ-LVGIVSYGIGCANPFFPGVYANVAELKPW 237
            |:..::::..:|..... :.|||||||||||...| |||:|::|..||.. :|.|:.:||....|
  Fly   197 RNANWLSEGHVCTFTQEGEGSCHGDSGGPLVDANQTLVGVVNWGEACAIG-YPDVFGSVAYYHDW 260

  Fly   238 ILNAIEQL 245
                |||:
  Fly   261 ----IEQM 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 68/222 (31%)
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 69/227 (30%)

Return to query results.
Submit another query.