DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser12 and Tmprss11c

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001399454.1 Gene:Tmprss11c / 408213 RGDID:1302967 Length:431 Species:Rattus norvegicus


Alignment Length:231 Identity:86/231 - (37%)
Similarity:113/231 - (48%) Gaps:19/231 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RIVGGHPVLISEVPWQAALMYSEKYICGAVIYSDKIIITAAHCVER---PFDTLYSVRVGSVWKN 84
            ::.||......|.||||:|..:..:.|||.:.|:..:||||||..|   |.|  :.|..|.:...
  Rat   199 KVAGGQDAEEGEWPWQASLQQNNVHRCGATLISNSWLITAAHCFVRSANPKD--WKVSFGFLLSK 261

  Fly    85 LGGQHARVAVIRKHEDYVSSTILFNDIAVIRLVDTLIFNAEVRPIQLADSAP--AAGTEASVSGW 147
            ...|.| |..|..||:| |.....|||||:||...:::...:|...|.::..  ...::..|:||
  Rat   262 PQAQRA-VKSIVIHENY-SYPAHNNDIAVVRLSSPVLYENNIRRACLPEATQKFPPNSDVVVTGW 324

  Fly   148 GEIGILWLQPTSLLKTSVKILDPNVCKRSYQY---ITKTMICAAAL--LKDSCHGDSGGPLVSGG 207
            |.:......|..|.|..|||:|...|.....|   ||..|:||..|  ..|:|.|||||||||..
  Rat   325 GTLKSDGDSPNILQKGRVKIIDNKTCNSGKAYGGVITPGMLCAGFLEGRVDACQGDSGGPLVSED 389

  Fly   208 Q-----LVGIVSYGIGCANPFFPGVYANVAELKPWI 238
            .     |.||||:|..||.|..||||..|...:.||
  Rat   390 SKGIWFLAGIVSWGDECALPNKPGVYTRVTHYRDWI 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 84/229 (37%)
Tmprss11cNP_001399454.1 SEA 62..161 CDD:460188
Tryp_SPc 200..428 CDD:238113 86/230 (37%)
Blue background indicates that the domain is not in the aligned region.

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