DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser12 and Klk4

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001004101.1 Gene:Klk4 / 408210 RGDID:1303228 Length:256 Species:Rattus norvegicus


Alignment Length:257 Identity:82/257 - (31%)
Similarity:125/257 - (48%) Gaps:31/257 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WLV--LVASVTLISAGSSPERIVGGHPVLISEVPWQAALMYSE--KYICGAVIYSDKIIITAAHC 65
            |.:  |:..||..||.|...||:.|...|....|||||| :||  .:.|..|:...:.:::||||
  Rat    11 WFLGYLILEVTGSSASSISSRIIQGQDCLPHSQPWQAAL-FSEDNAFFCSGVLVHPQWVLSAAHC 74

  Fly    66 VERPFDTLYSVRVGSVWKNLGGQ--------HARVAVIRKHEDYVSSTILFNDIAVIRLVDTLIF 122
            ::.      |..||....||.|.        .|.:::  :|.:| :.....||:.:|:|.::::.
  Rat    75 IQD------SYTVGLGLHNLEGSQEPGSRMLEAHLSI--QHPNY-NDPSFANDLMLIKLNESVME 130

  Fly   123 NAEVRPIQLADSAPAAGTEASVSGWGEI--GILWLQPTSLLKTSVKILDPNVCKRSYQYITK-TM 184
            :..:|.|.:|...|..|....|||||.:  |.|   |:.|...::.:.....|:..|..:.. :|
  Rat   131 SNTIRRIPVASQCPTPGDTCLVSGWGRLKNGKL---PSLLQCVNLSVASEETCRLLYDPVYHLSM 192

  Fly   185 ICAAA--LLKDSCHGDSGGPLVSGGQLVGIVSYGIG-CANPFFPGVYANVAELKPWILNAIE 243
            .||..  ..||:|:||||||:|....|.|:||.|.| |..|..|.||.|:.:...||...|:
  Rat   193 FCAGGGPDRKDTCNGDSGGPIVCNRSLQGLVSMGQGECGQPGIPSVYTNLCKFTNWIWTTIQ 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 72/230 (31%)
Klk4NP_001004101.1 Tryp_SPc 35..249 CDD:238113 70/226 (31%)

Return to query results.
Submit another query.