DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser12 and Tmprss4

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:XP_038937788.1 Gene:Tmprss4 / 367074 RGDID:1305033 Length:478 Species:Rattus norvegicus


Alignment Length:257 Identity:86/257 - (33%)
Similarity:123/257 - (47%) Gaps:38/257 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VASVTLISAGSS--PERIVGGHPVLISEVPWQAALMYSEKYICGAVIYSDKIIITAAHCVERPFD 71
            :.|:..:..|.|  ..|:|||........|||.::.|:::::||..|.....|:|||||..:..|
  Rat   229 LVSLRCLDCGKSLKTTRVVGGVEASADSWPWQVSIQYNKQHVCGGSILDHHWILTAAHCFRKYLD 293

  Fly    72 -TLYSVRVGSVWKNLGGQH----ARVAV-----IRKHEDYVSSTILFNDIAVIRLVDTLIFNAEV 126
             :.:.||.||  ..||...    |::.:     ::..|         .|||:::|...|.|:..|
  Rat   294 VSSWKVRAGS--NKLGNSPSLPVAKIFIAEPNPLQPKE---------KDIALVKLKMPLTFSGSV 347

  Fly   127 RPIQL--ADSAPAAGTEASVSGWG---EIGILWLQPTSLLKTSVKILDPNVCKRSYQY---ITKT 183
            |||.|  :|..........|.|||   |.|  .....:||:.||:::|...|.....|   :|..
  Rat   348 RPICLPFSDEELIPTMPVWVIGWGFTEENG--GKMSDTLLQASVQVIDSARCNAEDAYQGEVTAG 410

  Fly   184 MICAAALL--KDSCHGDSGGPLV---SGGQLVGIVSYGIGCANPFFPGVYANVAELKPWILN 240
            |:||....  ||:|.|||||||:   ...|:|||||:|.||.:|..||||..|.....||.|
  Rat   411 MLCAGTPQGGKDTCQGDSGGPLMYHYDKWQVVGIVSWGYGCGSPSTPGVYTKVTAYLDWIYN 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 80/237 (34%)
Tmprss4XP_038937788.1 LDLa 99..133 CDD:238060
SRCR_2 149..238 CDD:470597 1/8 (13%)
Tryp_SPc 245..470 CDD:214473 80/237 (34%)
Blue background indicates that the domain is not in the aligned region.

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