DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser12 and Tmprss11b

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:XP_063129516.1 Gene:Tmprss11b / 365265 RGDID:1303278 Length:420 Species:Rattus norvegicus


Alignment Length:234 Identity:83/234 - (35%)
Similarity:113/234 - (48%) Gaps:23/234 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ERIVGGHPVLISEVPWQAALMYSEKYICGAVIYSDKIIITAAHCVERP-----FDTLYSVRVGSV 81
            :||.||......|.||||:|..:.|:.|||.:..::.::|||||..|.     ....:..||...
  Rat   187 DRITGGSTAQKGEWPWQASLRVNGKHHCGASLIGERFLLTAAHCFLRTNNPKNLTVSFGTRVTPA 251

  Fly    82 WKNLGGQHARVAVIRKHEDYVSSTILFNDIAVIRLVDTLIFNAEVRPIQLADSAPA--AGTEASV 144
            :.    ||....|| .|||||... ..:|:|:|:|.:.:.|..:|..:.|.::...  .|....|
  Rat   252 YM----QHYVEEVI-IHEDYVKGQ-HHDDVAIIKLTEKVSFRNDVHRVCLPEATQVFPPGEGVVV 310

  Fly   145 SGWGEIGILWLQPTSLLKTSVKILDPNVCKRSYQY---ITKTMICAAAL--LKDSCHGDSGGPLV 204
            :|||.:......|..|.|.|:||:|.|.|.....|   |..||:||..:  ..|:|.||||||||
  Rat   311 TGWGSLSYNGKSPLLLQKASIKIIDTNACNSEEAYGGRIMDTMLCAGYMEGYVDACQGDSGGPLV 375

  Fly   205 SGGQ-----LVGIVSYGIGCANPFFPGVYANVAELKPWI 238
            ....     ||||||:|..|.....||||..|...:.||
  Rat   376 HPNSRDIWYLVGIVSWGHECGRVNKPGVYMRVTSYRDWI 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 81/231 (35%)
Tmprss11bXP_063129516.1 None

Return to query results.
Submit another query.