DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser12 and CG1304

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster


Alignment Length:259 Identity:78/259 - (30%)
Similarity:124/259 - (47%) Gaps:30/259 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLHWLVLVASVTLISA-GSSPERIVGGHPVLISEVPWQAALMYSEKYICGAVIYSDKIIITAAH 64
            :||...:|:.:|.:.|| ||...|:|||...:.::.|.|.:|..:..:.||..|.|...::||||
  Fly     8 ILLGSFLLLLAVPVHSAPGSLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRNYVLTAAH 72

  Fly    65 CV--------------ERPFDTLYSVRVGSVWKNLGGQHARVAVIRKHEDYVSSTILFNDIAVIR 115
            ||              ||     :::|.||..:..||...:||.:..||:|.:   ..||:|::|
  Fly    73 CVTNQDSNGNSVPIAAER-----FTIRAGSNDRFSGGVLVQVAEVIVHEEYGN---FLNDVALLR 129

  Fly   116 LVDTLIFNAEVRPIQLADSAPAAGTEASVSGWGEIGILWLQPTSLLKTSVKILDPNVCKRSYQYI 180
            |...||.:|.::||.|..:...|..:..:||||.|......|..|...::|.:....|.....:.
  Fly   130 LESPLILSASIQPIDLPTADTPADVDVIISGWGRIKHQGDLPRYLQYNTLKSISLERCDELIGWG 194

  Fly   181 TKTMICAAALLKD----SCHGDSGGPLVSGGQLVGIVSYGIGCANPFFPGVYANVAELKPWILN 240
            .::.:|   |:.:    :|:||||||.|...|:||:..:........:|..||.|.....||.|
  Fly   195 VQSELC---LIHEADNGACNGDSGGPAVYNNQVVGVAGFVWSACGTSYPDGYARVYYHNEWIKN 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 67/232 (29%)
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 69/235 (29%)

Return to query results.
Submit another query.