DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser12 and LOC3290013

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:XP_556287.4 Gene:LOC3290013 / 3290013 VectorBaseID:AGAMI1_001965 Length:313 Species:Anopheles gambiae


Alignment Length:254 Identity:72/254 - (28%)
Similarity:118/254 - (46%) Gaps:56/254 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RIVGGHPVLISEVPWQAAL---MYSEKYICGAVIYSDKIIITAAHCVERPFDTLYSVRVGSVWKN 84
            |||||......::|:|.|:   :.:.:.:||.|:.|:..::||..|||.....:  |.:|::  |
Mosquito    69 RIVGGSIATAGQIPYQVAILSDLEAGQALCGGVLLSNNFVLTAGVCVENTSGGV--VVLGAL--N 129

  Fly    85 L-----GGQHARVAV----IRKHEDYVSSTILFNDIAVIRLVDTLIFNAEVRPIQL---ADSAPA 137
            |     .|| .|:..    :|.||::: :.|..|:||.|||.:.:.|:..::|:::   ||....
Mosquito   130 LQNEAEAGQ-VRITFAAGDVRLHEEFL-AVIFRNNIAAIRLSEPVSFSDRIQPVRIPAAADGRTF 192

  Fly   138 AGTEASVSGWGEIGILWLQPTSLLKTSVKILDPNVCKRSYQYITKTMICAAAL------------ 190
            ||..|:|||:|.        ||...||..    :|.:.....|.....|.|..            
Mosquito   193 AGALATVSGFGR--------TSDSSTSFS----DVLRYVRNPIMTNADCFATAWGGLIDGQKMCL 245

  Fly   191 ----LKDSCHGDSGGPL--VSGGQ--LVGIVSYG--IGCANPFFPGVYANVAELKPWIL 239
                .:..|.||.|||:  ..||.  |||:.|:|  :||.:. :|.|:..:...:.||:
Mosquito   246 HYMEARAPCDGDVGGPMTVADGGSTLLVGLYSFGSVLGCESD-WPAVFVRITFYRQWIV 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 70/251 (28%)
LOC3290013XP_556287.4 None

Return to query results.
Submit another query.