DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser12 and Tmprss11b

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_795998.2 Gene:Tmprss11b / 319875 MGIID:2442893 Length:416 Species:Mus musculus


Alignment Length:236 Identity:87/236 - (36%)
Similarity:116/236 - (49%) Gaps:27/236 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ERIVGGHPVLISEVPWQAALMYSEKYICGAVIYSDKIIITAAHCVE-----RPFDTLYSVRVGSV 81
            :||.||......|.||||:|..:.|:.|||.:..::.::|||||.:     :.....:..||...
Mouse   183 DRITGGSTAHKGEWPWQASLRVNGKHYCGASLIGERFLLTAAHCFQGTNNPKNLTVSFGTRVTPA 247

  Fly    82 WKNLGGQHARVAVIRKHEDYVSSTILFNDIAVIRLVDTLIFNAEVRPIQLADSA----PAAGTEA 142
            :.    ||: |..|..|||||... ..:|:|||:|.:.:.||.:|..:.|.:|.    |..|  .
Mouse   248 YM----QHS-VQEIIIHEDYVKGE-HHDDVAVIKLTEKVSFNNDVHRVCLPESTQIFPPGEG--V 304

  Fly   143 SVSGWGEIGILWLQPTSLLKTSVKILDPNVCKRSYQY---ITKTMICAAAL--LKDSCHGDSGGP 202
            .|:|||........|..|.|.|:||:|.|.|.....|   |..||:||..|  ..|:|.||||||
Mouse   305 VVTGWGSFSYNGKSPLLLQKASIKIIDTNTCNSEEAYGGRIVDTMLCAGYLEGSIDACQGDSGGP 369

  Fly   203 LVSGGQ-----LVGIVSYGIGCANPFFPGVYANVAELKPWI 238
            ||....     ||||||:|..|.....||||..|...:.||
Mouse   370 LVHPNSRDIWYLVGIVSWGHECGRVNKPGVYMRVTSYRNWI 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 85/233 (36%)
Tmprss11bNP_795998.2 SEA 46..143 CDD:460188
Tryp_SPc 185..413 CDD:238113 86/234 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.