DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser12 and Ovch2

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:XP_003749007.2 Gene:Ovch2 / 308919 RGDID:1564636 Length:579 Species:Rattus norvegicus


Alignment Length:289 Identity:77/289 - (26%)
Similarity:123/289 - (42%) Gaps:58/289 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVLVASVTLISAGSS-------------------PE-------RIVGGHPVLISEVPWQAALMYS 44
            |:|:..:..:..|.|                   |:       |||||..|.....|||.:|...
  Rat     8 LILILGIVCLEQGHSATLSSIRAPDCGKSLVKPWPQNYFSLFSRIVGGSQVEKGSYPWQVSLKQK 72

  Fly    45 EKYICGAVIYSDKIIITAAHCV-ERPFDTLYSVRVGSVWKNL-----GGQHARVAVIRKHEDYVS 103
            :|:|||..|.|.:.:||||||: .|......:|..|.  .:|     |.|...:..|..|..:.:
  Rat    73 QKHICGGTIISSQWVITAAHCMANRNIALTLNVTAGE--HDLSQAEPGEQTLAIETIIIHPQFST 135

  Fly   104 STILFNDIAVIRLVDTLIFNAEVRPIQLADSAPA--AGTEASVSGWGEIGILWLQPTSLLKTSVK 166
            ...:..|||::::|.|..|...|||:.|.:....  ||...:.:|||.:......|..|.:.::.
  Rat   136 KKPMNYDIALLKMVGTFQFGQFVRPVCLPEPGEQFNAGYICTTAGWGRLSEGGSLPQVLQQVNLP 200

  Fly   167 ILDPNVCKRSYQYIT-----KTMICAAAL--LKDSCHGDSGGPLVSGGQ-----LVGIVSYGIGC 219
            ||....|:.....:.     ||.:|..:.  .:|:|.|||||.|:...:     |.|:.|:|:||
  Rat   201 ILTHEECEAVMLTLRNPITGKTFLCTGSPDGGRDACQGDSGGSLMCQNRKGAWTLAGVTSWGLGC 265

  Fly   220 ANPF----------FPGVYANVAELKPWI 238
            ...:          .||::.::..:.|||
  Rat   266 GRSWRNNARKKEQGSPGIFTDLRRVLPWI 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 70/244 (29%)
Ovch2XP_003749007.2 Tryp_SPc 52..297 CDD:238113 71/245 (29%)
CUB 317..420 CDD:238001
CUB 431..541 CDD:238001
Blue background indicates that the domain is not in the aligned region.

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