DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser12 and F11

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001398595.1 Gene:F11 / 290757 RGDID:1309364 Length:622 Species:Rattus norvegicus


Alignment Length:242 Identity:86/242 - (35%)
Similarity:117/242 - (48%) Gaps:37/242 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RIVGGHPVLISEVPWQAALMYSEKYICGAVIYSDKIIITAAHC---VERPFDTL--YSVRVGSVW 82
            |:.||...:..|.|||..|..::.::||..|..::.|:|||||   .|.| .||  |...|....
  Rat   387 RVFGGAASVHGEWPWQVTLHTTQGHLCGGSIIGNRWILTAAHCFSGTETP-KTLRVYGGIVNQSE 450

  Fly    83 KNLGGQHARVAVIRKHEDYVSSTILFNDIAVIRLVDTLIFNAEVRPIQLADSAPAAG------TE 141
            .|......||..:..|:.|.|:...| |||:::|...:.:....|||.|    |:.|      ||
  Rat   451 INEDTTFFRVQEMIIHDQYTSAESGF-DIALLKLEPAMNYTDFQRPICL----PSKGDRNVVHTE 510

  Fly   142 ASVSGWG------EIGILWLQPTSLLKTSVKILDPNVCKRSYQ--YITKTMICAAALL--KDSCH 196
            ..|:|||      |:      .::|.|..|.::....|:..|:  .||..:|||....  ||:|.
  Rat   511 CWVTGWGYTKSRDEV------QSTLQKAKVPLVSNEECQTRYRKHKITNKVICAGYKEGGKDTCK 569

  Fly   197 GDSGGPLV---SG-GQLVGIVSYGIGCANPFFPGVYANVAELKPWIL 239
            |||||||.   :| ..||||.|:|.||.....||||.|||:...|||
  Rat   570 GDSGGPLSCKHNGVWHLVGITSWGEGCGQKERPGVYTNVAKYVDWIL 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 83/239 (35%)
F11NP_001398595.1 APPLE 20..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519
APPLE 291..374 CDD:128519
Tryp_SPc 388..615 CDD:238113 82/238 (34%)
Blue background indicates that the domain is not in the aligned region.

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