DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser12 and LOC286960

DIOPT Version :9

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_775423.1 Gene:LOC286960 / 286960 RGDID:708585 Length:247 Species:Rattus norvegicus


Alignment Length:226 Identity:81/226 - (35%)
Similarity:113/226 - (50%) Gaps:16/226 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ERIVGGHPVLISEVPWQAALMYSEKYICGAVIYSDKIIITAAHCVERPFDTLYSVRVGSVWKNL- 85
            ::||||:......||:|.:|.....:.||..:.||:.:::||||.:|..    .||:|.  .|: 
  Rat    22 DKIVGGYTCPKHLVPYQVSLHDGISHQCGGSLISDQWVLSAAHCYKRKL----QVRLGE--HNIH 80

  Fly    86 ----GGQHARVAVIRKHEDYVSSTILFNDIAVIRLVDTLIFNAEVRPIQLADSAPAAGTEASVSG 146
                |.|......|.:|.:|...| |.|||.:|:|....:.|::|..:.|..|..:...:..|||
  Rat    81 VLEGGEQFIDAEKIIRHPEYNKDT-LDNDIMLIKLKSPAVLNSQVSTVSLPRSCASTDAQCLVSG 144

  Fly   147 WGE-IGILWLQPTSLLKTSVKILDPNVCKRSYQ-YITKTMICAAALL--KDSCHGDSGGPLVSGG 207
            ||. :.|....|..|......:|..:.||:||. .||..|.|...|.  ||||.||||||:|..|
  Rat   145 WGNTVSIGGKYPALLQCLEAPVLSASSCKKSYPGQITSNMFCLGFLEGGKDSCDGDSGGPVVCNG 209

  Fly   208 QLVGIVSYGIGCANPFFPGVYANVAELKPWI 238
            ::.||||:|..||....||||..|.....||
  Rat   210 EIQGIVSWGSVCAMRGKPGVYTKVCNYLSWI 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 79/223 (35%)
Tryp_SPc 24..238 CDD:238113 79/222 (36%)
LOC286960NP_775423.1 Tryp_SPc 23..240 CDD:214473 79/223 (35%)
Tryp_SPc 24..243 CDD:238113 81/224 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBP0
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 152 1.000 Inparanoid score I4263
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8948
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

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