DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser12 and Prss3b

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_775150.1 Gene:Prss3b / 286911 RGDID:708437 Length:247 Species:Rattus norvegicus


Alignment Length:249 Identity:83/249 - (33%)
Similarity:123/249 - (49%) Gaps:17/249 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LHWLVLVASVTLISAGSSPERIVGGHPVLISEVPWQAALMYSEKYICGAVIYSDKIIITAAHCVE 67
            |.:|..:.:...:......::||||:....:.:|:|.:| .:..:.||..:.:.:.:::||||  
  Rat     4 LIFLAFLGAAVALPLDDDDDKIVGGYTCQKNSLPYQVSL-NAGYHFCGGSLINSQWVVSAAHC-- 65

  Fly    68 RPFDTLYSVRVGSVWKNL-----GGQHARVAVIRKHEDYVSSTILFNDIAVIRLVDTLIFNAEVR 127
              :.:...||:|.  .|:     |.|....|.|.:|..|.::| ..|||.:|:|......|:.|.
  Rat    66 --YKSRIQVRLGE--HNIDVVEGGEQFIDAAKIIRHPSYNANT-FDNDIMLIKLNSPATLNSRVS 125

  Fly   128 PIQLADSAPAAGTEASVSGWGEIGILWLQPTSLLK-TSVKILDPNVCKRSYQ-YITKTMICAAAL 190
            .:.|..|..::||:..|||||..........|||: ....:|..:.||.||. .||..|.|...|
  Rat   126 TVSLPRSCGSSGTKCLVSGWGNTLSSGTNYPSLLQCLDAPVLSDSSCKSSYPGKITSNMFCLGFL 190

  Fly   191 L--KDSCHGDSGGPLVSGGQLVGIVSYGIGCANPFFPGVYANVAELKPWILNAI 242
            .  ||||.||||||:|..|||.|:||:|.|||....||||..|.....||...:
  Rat   191 EGGKDSCQGDSGGPVVCNGQLQGVVSWGYGCAQKGKPGVYTKVCNYVNWIQQTV 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 79/223 (35%)
Prss3bNP_775150.1 Tryp_SPc 25..243 CDD:238113 81/225 (36%)

Return to query results.
Submit another query.