DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser12 and Klkb1

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_036857.2 Gene:Klkb1 / 25048 RGDID:67382 Length:638 Species:Rattus norvegicus


Alignment Length:251 Identity:93/251 - (37%)
Similarity:124/251 - (49%) Gaps:44/251 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RIVGGHPVLISEVPWQAAL---MYSEKYICGAVIYSDKIIITAAHCVERPFDTLYSVRVGSVWKN 84
            |||||....:.|.|||.:|   :.|:.::||..|...:.|:|||||    ||   .:....||:.
  Rat   390 RIVGGTNSSLGEWPWQVSLQVKLVSQNHMCGGSIIGRQWILTAAHC----FD---GIPYPDVWRI 447

  Fly    85 LGG-----------QHARVAVIRKHEDYVSSTILFNDIAVIRLVDTLIFNAEVRPIQLADSAP-- 136
            .||           ..:.:..:..|:.|..|...: |||:|:|...|.:....:||.|...|.  
  Rat   448 YGGILNLSEITNKTPFSSIKELIIHQKYKMSEGSY-DIALIKLQTPLNYTEFQKPICLPSKADTN 511

  Fly   137 AAGTEASVSGWG---EIGILWLQPTSLLKTSVKILDPN-VCKRSYQ--YITKTMICAAALLK--- 192
            ...|...|:|||   |.|    :..::|:.:...|.|| .|::.|:  .|||.||||.  .|   
  Rat   512 TIYTNCWVTGWGYTKERG----ETQNILQKATIPLVPNEECQKKYRDYVITKQMICAG--YKEGG 570

  Fly   193 -DSCHGDSGGPLV---SG-GQLVGIVSYGIGCANPFFPGVYANVAELKPWILNAIE 243
             |:|.||||||||   || .|||||.|:|.|||....||||..|||...|||..|:
  Rat   571 IDACKGDSGGPLVCKHSGRWQLVGITSWGEGCARKEQPGVYTKVAEYIDWILEKIQ 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 89/244 (36%)
Klkb1NP_036857.2 APPLE 21..104 CDD:128519
APPLE 111..194 CDD:128519
APPLE 201..284 CDD:128519
APPLE 292..375 CDD:128519
Tryp_SPc 391..621 CDD:238113 88/243 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.