DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser12 and CG30083

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_725492.3 Gene:CG30083 / 246444 FlyBaseID:FBgn0050083 Length:279 Species:Drosophila melanogaster


Alignment Length:233 Identity:65/233 - (27%)
Similarity:108/233 - (46%) Gaps:43/233 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PWQAALM-YSEK----YICGAVIYSDKIIITAAHCVERPFDTLYSVRVGSVWKNLGGQH--ARVA 93
            ||.|.:. |::|    .:||..:...:.:::||||::|  |.:.:||:        |:|  :|..
  Fly    46 PWMAYIFKYNDKEVAELVCGGTLIHKQFVLSAAHCIKR--DQILAVRL--------GEHSSSRYF 100

  Fly    94 VIRK--HEDYVSSTILFNDIAVIRLVDTLIFNAEVRPI-QLADSAPAAGTEA-SVSGWGEIGILW 154
            .:.|  ...|.::....|||.::|:...:.|||.:||| .:.|.......:. ..:|||:     
  Fly   101 AVTKAFRNKYFTTGSYSNDIGILRIQPIVKFNAVIRPICIITDPTKVPNVKTFKAAGWGK----- 160

  Fly   155 LQPTSLLKTSVKILDPNVCKRSYQY------ITKTMICAAALLKDSCHGDSGGPLV----SGGQL 209
             .........:|.::.|....|..|      :|::.|||.....|:|.|||||||:    ..|.|
  Fly   161 -TENETFSKVLKTVELNELNASECYNMLWVNVTESQICAGHPDGDTCAGDSGGPLIHPVYMDGSL 224

  Fly   210 ----VGIVSYGIGCANPFFPGVYANVAELKPWILNAIE 243
                :||:|:|....|.  ||||..::....|||..::
  Fly   225 RYVQLGIISFGSSLCNS--PGVYTRLSSFIDWILMVVD 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 62/226 (27%)
CG30083NP_725492.3 Tryp_SPc 34..255 CDD:238113 62/226 (27%)

Return to query results.
Submit another query.