DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser12 and LOC100498532

DIOPT Version :9

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001333498.1 Gene:LOC100498532 / 100498532 -ID:- Length:251 Species:Xenopus tropicalis


Alignment Length:255 Identity:90/255 - (35%)
Similarity:127/255 - (49%) Gaps:18/255 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLHWLVLVASVTLISAGSSP-----ERIVGGHPVLISEVPWQAALMYSEKYICGAVIYSDKIII 60
            |:..|:::..:|    |.::|     ::||||:.......|||....|:....||..:.|.:.||
 Frog     1 MMPLWVLMFLAV----AAAAPLDDDDDKIVGGYECTPHSQPWQVLFTYNGGNWCGGSLISPRWII 61

  Fly    61 TAAHCVERPFDTLYSVRVGSVWKNLGG--QHARVAVIRKHEDYVSSTILFNDIAVIRLVDTLIFN 123
            :||||.:.| .||.::......|...|  ||.:|....||..| ......:||.:::|.....:|
 Frog    62 SAAHCYQPP-KTLVALLGEHDLKKKEGTEQHIQVEAAYKHFGY-KDKAHDHDIMLVKLAKPAQYN 124

  Fly   124 AEVRPIQLADSAPAAGTEASVSGWGEI-GILWLQPTSLLKTSVKILDPNVCKRSY-QYITKTMIC 186
            ..|:||.:|.|.|..|.:..|||:|.: |.....|..|....|.|:..:.||.|| :.|::.|.|
 Frog   125 QYVQPIPVARSCPTDGAKCLVSGFGNVLGYNVRYPDQLQCLEVPIVSDSSCKASYPRMISENMFC 189

  Fly   187 AAALL--KDSCHGDSGGPLVSGGQLVGIVSYGIG-CANPFFPGVYANVAELKPWILNAIE 243
            |..|.  |.||||||||||:..|:|.|.||:|.. |.:...|||||.|.....||.|..|
 Frog   190 AGFLEGGKGSCHGDSGGPLICNGELYGAVSWGGSYCISKNSPGVYAKVCNYLDWIKNITE 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 81/221 (37%)
Tryp_SPc 24..238 CDD:238113 81/220 (37%)
LOC100498532NP_001333498.1 Tryp_SPc 25..247 CDD:238113 83/223 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.