DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser12 and LOC100490788

DIOPT Version :9

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001333500.1 Gene:LOC100490788 / 100490788 -ID:- Length:249 Species:Xenopus tropicalis


Alignment Length:249 Identity:87/249 - (34%)
Similarity:127/249 - (51%) Gaps:8/249 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLHWLVLVASVTLISAGSSPERIVGGHPVLISEVPWQAALMYSEKYICGAVIYSDKIIITAAHC 65
            |:..|:::..:|...:.....::||||:.......|||....::.:..||..:.|.:.||:||||
 Frog     1 MMPLWVLMFLAVAAAAPLDDDDKIVGGYECTPHSQPWQVFFTFNGRNWCGGSLISPRWIISAAHC 65

  Fly    66 VERPFDTLYSVRVGSVWKNLGG--QHARVAVIRKHEDYVSSTILFNDIAVIRLVDTLIFNAEVRP 128
            .:.| .||.::......|...|  ||.:|....||..| ......:||.:::|.....:|..|:|
 Frog    66 YQPP-KTLVALLGEHDLKKKEGTEQHIQVEAAYKHFGY-KDEAYDHDIMLVKLAKPAQYNQYVQP 128

  Fly   129 IQLADSAPAAGTEASVSGWGEIGILWLQ-PTSLLKTSVKILDPNVCKRSY-QYITKTMICAAAL- 190
            |.:|.|.|..|.:..|||:|.:....:: |..|....:.||..:.||.|| :.|::.|.||..| 
 Frog   129 IPVARSCPTDGAKCLVSGYGNLLAYNIRYPDQLQCLDLPILSDSSCKASYPRQISENMFCAGFLE 193

  Fly   191 -LKDSCHGDSGGPLVSGGQLVGIVSYGIGCANPFFPGVYANVAELKPWILNAIE 243
             .||||.|||||||:..|:|.|:||:|..||....|||||.|.....||.|..|
 Frog   194 GEKDSCQGDSGGPLICSGELYGVVSWGRYCARKNAPGVYAKVCNYLDWIKNITE 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 80/220 (36%)
Tryp_SPc 24..238 CDD:238113 80/219 (37%)
LOC100490788NP_001333500.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.