DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser12 and gzma

DIOPT Version :10

Sequence 1:NP_523456.1 Gene:Ser12 / 33406 FlyBaseID:FBgn0011832 Length:245 Species:Drosophila melanogaster
Sequence 2:XP_012808240.1 Gene:gzma / 100135014 XenbaseID:XB-GENE-482759 Length:267 Species:Xenopus tropicalis


Alignment Length:256 Identity:72/256 - (28%)
Similarity:118/256 - (46%) Gaps:24/256 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLHWLVLVASVTLI--SAGSSPERIVGGHPVLISEVPWQAALMYSEKYICGAVIYSDKIIITAA 63
            |.|....|::|:.|:  ..|:....|:.|........|:. |.:||....||..:.....::|||
 Frog    10 MRLFSFCLLSSILLLIHINGNICMDIIDGREAASHSRPYM-AYIYSRTGSCGGTLIKQNWVLTAA 73

  Fly    64 HCVERPFDTLYSV-RVGSVWKNLGGQHARVAVIR--KHEDYVSSTILFNDIAVIRLVDTLIFNAE 125
            |||....:.:... :|    |:...:..|.:|.|  .|..:.....: :||.::::......|..
 Frog    74 HCVVNNSEVILGAHKV----KSRENEQQRFSVARAIPHPCFEWKKKI-HDIQLLQIKGAAKLNKF 133

  Fly   126 VRPIQL--ADSAPAAGTEASVSGWGEIGILWLQPTSLLK-TSVKILDPNVCKRSYQ----YITKT 183
            |..::|  .|.....|:..|.:|||........|:.:|: .:|.::|...|.:.|:    .|:..
 Frog   134 VSVLKLPTTDMDVKPGSSCSTAGWGVTKPNGKTPSDVLREVNVTVVDRGTCNKIYKKFKTEISTN 198

  Fly   184 MICAAALLK-----DSCHGDSGGPLVSGGQLVGIVSYGIGCANPFFPGVYANV-AELKPWI 238
            |:||.|..|     |:|.|||||||:.|.:..||||:|..|.:|.:||:|..: |....||
 Frog   199 MLCAGAPKKSDKKYDACQGDSGGPLICGKEFSGIVSFGKKCGDPKYPGIYTRLTARYLQWI 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser12NP_523456.1 Tryp_SPc 23..238 CDD:214473 64/230 (28%)
gzmaXP_012808240.1 Tryp_SPc 35..262 CDD:238113 66/231 (29%)

Return to query results.
Submit another query.