DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4267 and Liph

DIOPT Version :9

Sequence 1:NP_001259919.1 Gene:CG4267 / 33405 FlyBaseID:FBgn0264979 Length:374 Species:Drosophila melanogaster
Sequence 2:XP_038944552.1 Gene:Liph / 681694 RGDID:1592849 Length:476 Species:Rattus norvegicus


Alignment Length:369 Identity:89/369 - (24%)
Similarity:152/369 - (41%) Gaps:84/369 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LLAFAAIVFASSSEKTELDPNATCNYTLVKKKTLGVDPSFWKKFFKHLIPFTSSRGKMQFILFKR 79
            ||:|..:|        :.|.:.||             |||.:..|...:..|..  .::.:|:.:
  Rat    44 LLSFMCLV--------KSDTDETC-------------PSFTRLSFHSAVVGTGL--SVRLMLYTQ 85

  Fly    80 DFADCGRELFVGDVENLRNSGFDARHQTRIVIHGWMSQSKGSHIRKVKNAYLSLTDPGPNGEPAP 144
            ....|.:.     :.:......:...:|..:|||:.                      |.|.|..
  Rat    86 RDQTCAQV-----INSTALGSLNVTKKTTFIIHGFR----------------------PTGSPPV 123

  Fly   145 Y-----------EDFNVIVCDWSKTSTNVNYYEVAKTVEDMGALLAELV-RYLNQEANMHYDDVY 197
            :           ::.||:|.||::.:|.|.|...:.....:..:|.|.: :.|.:.|::  |::|
  Rat   124 WMEELVQSLISVQEMNVVVVDWNRGATTVIYPHASSKTRKVALILKEFIDQMLAKGASL--DNIY 186

  Fly   198 VIGHSLGAQIAGSAGKQIMPYRFNTIYALDPAGPQFREKSDEYRIDASDASYVESIQTSV-SFGF 261
            :||.||||.|||..| ::...:...|..||||||.|..:..|.|:|.|||.:|:.|.:.. :.|:
  Rat   187 MIGVSLGAHIAGFVG-EMYSGKLGRITGLDPAGPLFNGRPPEDRLDPSDAQFVDVIHSDTDALGY 250

  Fly   262 EQPVGHATFYPNYGKNQKKC--YVYG------CSHKRSHDYFIESLTSPAGFWGPRCERHDDGTW 318
            .:.:||..||||.|.:|..|  .::|      |.|:.|...::.||.:........|:.:.|...
  Rat   251 REALGHIDFYPNGGLDQPGCPKTIFGGIKYFKCDHQMSVFLYLASLQNNCSITAYPCDSYRDYRN 315

  Fly   319 LLLMSDGEFRMGGEPSIPKNGTFYVKTYSKPPYAMGHRWQTEPP 362
            ...:|.|   .|...|.|..| :|...:.:      :.|..:||
  Rat   316 GKCVSCG---AGHIVSCPSLG-YYADNWRE------YLWDRDPP 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4267NP_001259919.1 Lipase 64..351 CDD:278576 75/307 (24%)
Pancreat_lipase_like 71..347 CDD:238363 74/296 (25%)
LiphXP_038944552.1 Pancreat_lipase_like 78..347 CDD:238363 75/308 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11610
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.