DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sau and Golph3

DIOPT Version :9

Sequence 1:NP_001014460.1 Gene:sau / 33402 FlyBaseID:FBgn0267378 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_076467.2 Gene:Golph3 / 78961 RGDID:621226 Length:298 Species:Rattus norvegicus


Alignment Length:296 Identity:210/296 - (70%)
Similarity:243/296 - (82%) Gaps:8/296 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RSDGLVRRSVKPRENGG----AEGGLNANTPDDNQDALDNLKDQEDNIDDGDSKETRLTLMEEVL 63
            ||.|||:|..:...|..    |.||...:..|:.|    :.:|::|:.|.|||||||||||||||
  Rat     7 RSSGLVQRRTEASRNAADKERAAGGGGGSGEDEAQ----SRRDEQDDDDKGDSKETRLTLMEEVL 67

  Fly    64 LLGLKDKEGYTSFWNDCISSGLRGCILIELGLRGRVMIEKSGMRRRGLCTRKLILKSDQQTGDVL 128
            ||||||:||||||||||||||||||:||||.||||:.:|..||||:.|.|||:|.|||..|||||
  Rat    68 LLGLKDREGYTSFWNDCISSGLRGCMLIELALRGRLQLEACGMRRKSLLTRKVICKSDAPTGDVL 132

  Fly   129 LDEALKHIKETDPPETVQSWIEYLSGETWNPLKLRYQLKNVRERLAKNLVEKGVLTTEKQNFLLF 193
            |||||||:|||.||||||:|||.|||||||||||.|||:||||||||||||||||||||||||||
  Rat   133 LDEALKHVKETQPPETVQNWIELLSGETWNPLKLHYQLRNVRERLAKNLVEKGVLTTEKQNFLLF 197

  Fly   194 DMTTHPLSDNVVKCRLVKKIQDSVLSKWVNDPQRMDKRMLALIFLAHASDVIENAFAPLNDDDYE 258
            |||||||::|.:|.||:||:|::||.||||||.|||||:||||:|||||||:|||||||.|:.|:
  Rat   198 DMTTHPLTNNNIKQRLIKKVQEAVLDKWVNDPHRMDKRLLALIYLAHASDVLENAFAPLLDEQYD 262

  Fly   259 VAMKRVRELLDLDFEAESAKPNANEILWAVFMAFTK 294
            :|.||||:|||||.|.|..|.|.||:||||..||||
  Rat   263 LATKRVRQLLDLDPEVECLKANTNEVLWAVVAAFTK 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sauNP_001014460.1 GPP34 58..267 CDD:283397 167/208 (80%)
Golph3NP_076467.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..57 18/53 (34%)
GPP34 62..271 CDD:399028 167/208 (80%)
Beta-hairpin required for oligomerization. /evidence=ECO:0000250 190..201 10/10 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354160
Domainoid 1 1.000 353 1.000 Domainoid score I968
eggNOG 1 0.900 - - E1_KOG3983
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56942
Inparanoid 1 1.050 419 1.000 Inparanoid score I1740
OMA 1 1.010 - - QHG51992
OrthoDB 1 1.010 - - D1117244at2759
OrthoFinder 1 1.000 - - FOG0002388
OrthoInspector 1 1.000 - - oto97427
orthoMCL 1 0.900 - - OOG6_103565
Panther 1 1.100 - - O PTHR12704
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1581
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

Return to query results.
Submit another query.