DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment sau and golph3

DIOPT Version :9

Sequence 1:	NP_001014460.1	Gene:	sau / 33402	FlyBaseID:	FBgn0267378	Length:	294	Species:	Drosophila melanogaster
Sequence 2:	NP_001107687.1	Gene:	golph3 / 733503	XenbaseID:	XB-GENE-1012460	Length:	290	Species:	Xenopus tropicalis

Alignment Length:	296	Identity:	202/296 - (68%)
Similarity:	236/296 - (79%)	Gaps:	16/296 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 RSDGLVRR----SVKPRENGGAEGGLNANTPDDNQDALDNLKDQEDNIDDGDSKETRLTLMEEVL 63
            ||.|||:|    |...||. .|||      .::.:|     :|.::..:.|..||.|||||||||
Frog     7 RSSGLVQRRTEASRSDRER-AAEG------EEEERD-----RDGQEEDERGGDKEARLTLMEEVL 59

  Fly    64 LLGLKDKEGYTSFWNDCISSGLRGCILIELGLRGRVMIEKSGMRRRGLCTRKLILKSDQQTGDVL 128
            ||||||:||||||||||||:|||||:||||..|||:.:|..||||:.|..||:..|||..||||:
Frog    60 LLGLKDREGYTSFWNDCISAGLRGCMLIELAFRGRIALESGGMRRKSLLARKVTFKSDAPTGDVM 124

  Fly   129 LDEALKHIKETDPPETVQSWIEYLSGETWNPLKLRYQLKNVRERLAKNLVEKGVLTTEKQNFLLF 193
            ||||||||||:..|||||||||.|||||||||||.:||:||||||||||||||||||||||||||
Frog   125 LDEALKHIKESPTPETVQSWIELLSGETWNPLKLHFQLRNVRERLAKNLVEKGVLTTEKQNFLLF 189

  Fly   194 DMTTHPLSDNVVKCRLVKKIQDSVLSKWVNDPQRMDKRMLALIFLAHASDVIENAFAPLNDDDYE 258
            |||||||::|.:|.||:||:|::||.|||.||.||::|:||||:|||:|||||||||||.||.|:
Frog   190 DMTTHPLTNNNIKQRLIKKVQEAVLDKWVKDPHRMERRLLALIYLAHSSDVIENAFAPLLDDQYD 254

  Fly   259 VAMKRVRELLDLDFEAESAKPNANEILWAVFMAFTK 294
            :||||||:|||||.|.||.|||||||||||...|||
Frog   255 LAMKRVRQLLDLDPEVESTKPNANEILWAVVATFTK 290

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
sau	NP_001014460.1	GPP34	58..267	CDD:283397	160/208 (77%)
golph3	NP_001107687.1	GPP34	54..270	CDD:377552	165/215 (77%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	342	1.000	Domainoid score	I1072
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H56942
Inparanoid	1	1.050	394	1.000	Inparanoid score	I1930
OMA	1	1.010	-	-		QHG51992
OrthoDB	1	1.010	-	-		D1117244at2759
OrthoFinder	1	1.000	-	-		FOG0002388
OrthoInspector	1	1.000	-	-		oto104111
Panther	1	1.100	-	-	O	PTHR12704
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X1581
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	11	11.080