DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sau and golph3b

DIOPT Version :10

Sequence 1:NP_608658.1 Gene:sau / 33402 FlyBaseID:FBgn0267378 Length:294 Species:Drosophila melanogaster
Sequence 2:XP_021334929.1 Gene:golph3b / 561662 ZFINID:ZDB-GENE-091117-10 Length:294 Species:Danio rerio


Alignment Length:296 Identity:208/296 - (70%)
Similarity:245/296 - (82%) Gaps:12/296 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RSDGLVRRSVKPRENGGAEGGLNANTPD----DNQDALDNLKDQEDNIDDGDSKETRLTLMEEVL 63
            |:.|||:|.        .|...||...|    |.:|..::.:.:|::.|.|||||||||||||||
Zfish     7 RNSGLVQRR--------TEASRNAAAADKEKIDGEDEFESRRGEEEDEDKGDSKETRLTLMEEVL 63

  Fly    64 LLGLKDKEGYTSFWNDCISSGLRGCILIELGLRGRVMIEKSGMRRRGLCTRKLILKSDQQTGDVL 128
            ||||||:||||||||||||||||||:||||.:|||:.:|.|||||:.|.|||::.|||..|||:|
Zfish    64 LLGLKDREGYTSFWNDCISSGLRGCMLIELAIRGRLQLEASGMRRKSLLTRKVLCKSDAPTGDML 128

  Fly   129 LDEALKHIKETDPPETVQSWIEYLSGETWNPLKLRYQLKNVRERLAKNLVEKGVLTTEKQNFLLF 193
            |||||||:|||.||||||||:|.|||||||||||.|||:||||||||||||||||||||||||||
Zfish   129 LDEALKHVKETQPPETVQSWVELLSGETWNPLKLHYQLRNVRERLAKNLVEKGVLTTEKQNFLLF 193

  Fly   194 DMTTHPLSDNVVKCRLVKKIQDSVLSKWVNDPQRMDKRMLALIFLAHASDVIENAFAPLNDDDYE 258
            |||||||::|.||.|||:|:|::||.||||:|||||||:|||:||||:|||:|||||||.||.|:
Zfish   194 DMTTHPLTNNTVKQRLVRKVQEAVLEKWVNEPQRMDKRILALLFLAHSSDVLENAFAPLLDDQYD 258

  Fly   259 VAMKRVRELLDLDFEAESAKPNANEILWAVFMAFTK 294
            :||||||.||||:.|.|:||..|||:||||..||||
Zfish   259 LAMKRVRMLLDLEPEVEAAKSGANELLWAVVAAFTK 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sauNP_608658.1 GPP34 58..269 CDD:428605 168/210 (80%)
golph3bXP_021334929.1 GPP34 58..265 CDD:428605 165/206 (80%)

Return to query results.
Submit another query.