DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sau and golph3a

DIOPT Version :9

Sequence 1:NP_001014460.1 Gene:sau / 33402 FlyBaseID:FBgn0267378 Length:294 Species:Drosophila melanogaster
Sequence 2:XP_005165358.1 Gene:golph3a / 450085 ZFINID:ZDB-GENE-041010-209 Length:295 Species:Danio rerio


Alignment Length:292 Identity:210/292 - (71%)
Similarity:241/292 - (82%) Gaps:3/292 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RSDGLVRRSVKPRENGGAEGGLNANTPDDNQDALDNLKDQEDNIDDGDSKETRLTLMEEVLLLGL 67
            ||.|||:|..:...:..|......:..:|.:....  ::.||: |.|||||||||||||||||||
Zfish     7 RSSGLVQRRTEASRSAAAADRERGSGDEDYEPRRG--EEPEDD-DSGDSKETRLTLMEEVLLLGL 68

  Fly    68 KDKEGYTSFWNDCISSGLRGCILIELGLRGRVMIEKSGMRRRGLCTRKLILKSDQQTGDVLLDEA 132
            ||:||||||||||||||||||:||||.||||:.:|..||||:.|..||:|.|||..|||||||||
Zfish    69 KDREGYTSFWNDCISSGLRGCMLIELALRGRLQLEACGMRRKSLLARKVICKSDAPTGDVLLDEA 133

  Fly   133 LKHIKETDPPETVQSWIEYLSGETWNPLKLRYQLKNVRERLAKNLVEKGVLTTEKQNFLLFDMTT 197
            |||||:|.||||||||||.|||||||||||.|||:||||||||||||||||||||||||||||||
Zfish   134 LKHIKDTQPPETVQSWIELLSGETWNPLKLHYQLRNVRERLAKNLVEKGVLTTEKQNFLLFDMTT 198

  Fly   198 HPLSDNVVKCRLVKKIQDSVLSKWVNDPQRMDKRMLALIFLAHASDVIENAFAPLNDDDYEVAMK 262
            |||::|.:|.||:||:|:|||.||||||.|||||:||||||||:|||:|||||||.||.|::|||
Zfish   199 HPLTNNNIKQRLIKKVQESVLEKWVNDPHRMDKRLLALIFLAHSSDVLENAFAPLLDDQYDLAMK 263

  Fly   263 RVRELLDLDFEAESAKPNANEILWAVFMAFTK 294
            |||:||||:.|.||.|.||||:||||..||||
Zfish   264 RVRQLLDLEPEGESMKNNANELLWAVVAAFTK 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sauNP_001014460.1 GPP34 58..267 CDD:283397 170/208 (82%)
golph3aXP_005165358.1 GPP34 59..268 CDD:283397 170/208 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596406
Domainoid 1 1.000 358 1.000 Domainoid score I927
eggNOG 1 0.900 - - E1_KOG3983
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 419 1.000 Inparanoid score I1779
OMA 1 1.010 - - QHG51992
OrthoDB 1 1.010 - - D1117244at2759
OrthoFinder 1 1.000 - - FOG0002388
OrthoInspector 1 1.000 - - otm25370
orthoMCL 1 0.900 - - OOG6_103565
Panther 1 1.100 - - O PTHR12704
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1661
SonicParanoid 1 1.000 - - X1581
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

Return to query results.
Submit another query.