DRSC/TRiP Functional Genomics Resources

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Protein Alignment papi and TDRD1

DIOPT Version :10

Sequence 1:NP_608657.1 Gene:papi / 33401 FlyBaseID:FBgn0031401 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_942090.1 Gene:TDRD1 / 56165 HGNCID:11712 Length:1189 Species:Homo sapiens


Alignment Length:413 Identity:87/413 - (21%)
Similarity:164/413 - (39%) Gaps:111/413 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 CDISGV--------PDAVKAARALLIKEIERAPVVKVELQVPQRLASKINGRGGELLQEIRSSSL 167
            |.::||        |:|:     .|:|::.:..::.|                 :::.::.:|||
Human   607 CVLAGVKPSLGIWTPEAI-----CLMKKLVQNKIITV-----------------KVVDKLENSSL 649

  Fly   168 AKLNIDLNGRNGKAKITIIGNQKQVNIARKMLDD--QIEEDEELVRSMEEVEQRREPRRSPTNSI 230
            .:| ||.:            ....|::::.:||.  .:.|...:.....:|::...|        
Human   650 VEL-IDKS------------ETPHVSVSKVLLDAGFAVGEQSMVTDKPSDVKETSVP-------- 693

  Fly   231 ASSMYSSQTSLSSHTQPRDKLMASKGEGKPMEVYVSAVASPTKFWVQLIGPQS-KKLDSMVQEMT 294
                    ..:.....|.:......|..:.::|.|..:.||.:|:..::...: |||:.:.:.:.
Human   694 --------LGVEGKVNPLEWTWVELGVDQTVDVVVCVIYSPGEFYCHVLKEDALKKLNDLNKSLA 750

  Fly   295 SYYSSAENRAKHVLTAPYVGQIVAAVFKFDEKWYRAEIVDIMPNQYNPKEQVIDLYFVDYGDSEY 359
            .:   .:.:..:...|. :||...|.|..|..||||.:.:|:||.:      :.::|||||:.|.
Human   751 EH---CQQKLPNGFKAE-IGQPCCAFFAGDGSWYRALVKEILPNGH------VKVHFVDYGNIEE 805

  Fly   360 ISPADICELRTDFLTLRFQAVECFLANVKSTIQTEPITWPKSSIAKFEELTEVAHWRKLIARVVT 424
            ::..::..:.:.||.|.||.:.|.||:    ||:....|.:.:|.:|:......   ||.||||.
Human   806 VTADELRMISSTFLNLPFQGIRCQLAD----IQSRNKHWSEEAITRFQMCVAGI---KLQARVVE 863

  Fly   425 YKERPRATTAVSAAAKEGTPLPGVELFDPADNSELNIADLMITQGFAL----PLDD--------- 476
            ..|             .|.   ||||.|.:......|:|::|.:...|    |..|         
Human   864 VTE-------------NGI---GVELTDLSTCYPRIISDVLIDEHLVLKSASPHKDLPNDRLVNK 912

  Fly   477 ---SYPVRSRSSTPSSNSDSTIE 496
               ...|:...:|.|:....|||
Human   913 HELQVHVQGLQATSSAEQWKTIE 935

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
papiNP_608657.1 KH_1 68..129 CDD:459630 6/25 (24%)
KH-I 140..209 CDD:469614 10/70 (14%)
Tudor_TDRD2 281..383 CDD:410483 27/102 (26%)
TDRD1NP_942090.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..66
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..138
zf-MYND 170..206 CDD:460312
Tudor_TDRD1_rpt1 268..396 CDD:410479
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 450..469
Tudor_TDRD1_rpt2 517..598 CDD:410480
TUDOR 715..832 CDD:425754 34/126 (27%)
Tudor_TDRD1_rpt4 944..1059 CDD:410482
Blue background indicates that the domain is not in the aligned region.

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