DRSC/TRiP Functional Genomics Resources

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Protein Alignment papi and tdrd1

DIOPT Version :10

Sequence 1:NP_608657.1 Gene:papi / 33401 FlyBaseID:FBgn0031401 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001157500.1 Gene:tdrd1 / 553522 ZFINID:ZDB-GENE-070803-1 Length:1176 Species:Danio rerio


Alignment Length:508 Identity:108/508 - (21%)
Similarity:188/508 - (37%) Gaps:130/508 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 ADSGGQRPASG-------------IRGQTEEQKPQKEVCLKIV--VDNEHVPLIMGRGGSNIKLI 91
            |.|...|||.|             .|.:......:..||:..:  .::|.|.|      :.::.|
Zfish   447 AASDDFRPAPGTVCCSLFSEDNQWYRAKVLAYSSEDRVCVGYIDFGNSEEVEL------NRLRPI 505

  Fly    92 EEKTLAKIRLRDKDSGHKFCDISGVPDAVKAARALLIKEIERAPVVKVELQVPQRLASKINGRGG 156
            .::.||   |..:........|..:.|.......|::|.:.....::||:               
Zfish   506 SKELLA---LATQAIPCSLAGIKSLTDTWSDEAVLMLKHLVCNRFIRVEI--------------- 552

  Fly   157 ELLQEIRSSSLAKLNIDLNGRNGKAKITIIGNQKQVNIARKMLDDQIEEDEELVR----SMEEVE 217
                             |..::|:|.:::|....         |.|....|.||.    ::|.||
Zfish   553 -----------------LGKKDGRALVSMIDESS---------DPQASVTELLVNMGFAAIESVE 591

  Fly   218 -QRREPRRSPTNSIASSMYSSQTSLSSHTQPRDKLMASKG-----EGKPMEVYVSAVASPTKFWV 276
             ::.||  .|..|         |.:...:||..:.:...|     :|:.:|:.:|.:.|..:|:.
Zfish   592 TKKNEP--DPATS---------TEIPPLSQPVVEKLEWTGAELPFDGQKVELVISTLKSLDEFYC 645

  Fly   277 QLIGPQSKKLDSMVQEMTSYYSSAENRAKHVLTAPYVGQIVAAVFKFDEKWYRAEIVDIMPNQYN 341
            .   ..||..:..:.|| |:.......::.....|.||:...|:|..|.:||||.::::.     
Zfish   646 Y---NYSKTDEHTLTEM-SFELMKHCESERAPFTPIVGEPCCALFTGDARWYRAMVLEVC----- 701

  Fly   342 PKEQVIDLYFVDYGDSEYISPADICELRTDFLTLRFQAVECFLANVKSTIQTEPI--TWPKSSIA 404
             .|....:.|||||:|..:..|.:..:....|.|.|||:.|:||.|      ||:  .|.|.::.
Zfish   702 -GEGKARVCFVDYGNSCEVDAAHLKAITQSLLKLPFQAIRCWLAGV------EPVEGQWKKEAML 759

  Fly   405 KFEELTEVAHWRKLIARVVTYKERPRATTAVSAAAKEGTPL---------------PGVELFDPA 454
            :|:.|   ...:.|..:|::..|:.......||.....:.|               |.::...||
Zfish   760 RFQAL---CAGQPLSGKVLSITEKGYGMELESAGQTVASVLISEHLAKPYGQVRQPPQIQPAKPA 821

  Fly   455 DNSELNIADLMITQGFALPLDDSYPVRSRSSTPSSNSDSTIEELCVSNPVTPL 507
            .    .|.||...:    |:|.:..|.......|..:.:|.|:|.||:...||
Zfish   822 S----QIEDLPSLK----PIDQNPSVEEPLKVSSKGAATTPEDLPVSSGCFPL 866

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
papiNP_608657.1 KH_1 68..129 CDD:459630 10/62 (16%)
KH-I 140..209 CDD:469614 8/68 (12%)
Tudor_TDRD2 281..383 CDD:410483 28/101 (28%)
tdrd1NP_001157500.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
zf-MYND 83..119 CDD:460312
Tudor_TDRD1_rpt1 178..306 CDD:410479
Tudor_TDRD1_rpt2 429..510 CDD:410480 13/68 (19%)
Tudor_TDRD1_rpt3 674..732 CDD:410481 18/63 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 828..853 4/28 (14%)
Tudor_TDRD1_rpt4 881..995 CDD:410482
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1061..1090
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1116..1137
Blue background indicates that the domain is not in the aligned region.

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