DRSC/TRiP Functional Genomics Resources

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Protein Alignment papi and tdrkh

DIOPT Version :10

Sequence 1:NP_608657.1 Gene:papi / 33401 FlyBaseID:FBgn0031401 Length:576 Species:Drosophila melanogaster
Sequence 2:XP_073773714.1 Gene:tdrkh / 541541 ZFINID:ZDB-GENE-050327-81 Length:885 Species:Danio rerio


Alignment Length:715 Identity:165/715 - (23%)
Similarity:286/715 - (40%) Gaps:218/715 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KLLLGFGLCSLGGAMLYAYFKTRNDEEEADSGGQRPASGIRGQTEEQKPQKEVCLKIVVD----- 73
            |:.|..|: |:|..:.|..::                 .||..||:.:.::|..:.:.:|     
Zfish    49 KVALAAGI-SVGATVGYLIYR-----------------HIRNSTEQCQSKEESRISVPLDVYRSI 95

  Fly    74 ----NEHVPLIMGRGGSNIKLI---EEKTLAKIRLRDKDSGHKFCDISGVPDAVKAARALLIKEI 131
                :..:.::..:.|:.|.::   ||:.:....            |.|.|:.:..|:..|.|..
Zfish    96 ARYQSAFLDIVNQKSGAQINVLPNTEEQNMVNFL------------IQGSPEQILIAQCALEKLA 148

  Fly   132 ERAPVVKVELQVPQRLASKINGRGGELLQEIRSSSLAKLNIDLN-GR----NGKAKITIIGNQKQ 191
            ....|:...:.|||....:|.|||||.|:.|...|.||:|...: ||    ||  ||||.|.:|:
Zfish   149 TDCEVITDVIDVPQTAFGRIIGRGGETLKFINRVSGAKVNCSKDRGRTLEENG--KITITGTRKE 211

  Fly   192 VNIARKMLDDQIEEDEELVRSMEE---VEQRREPRRS---------------PT----------- 227
            :..|::|:.:::.|:|.:.:.:.:   :.|||:|..:               ||           
Zfish   212 IQSAKEMIMEKVIENETVRKRISQASALRQRRKPPETQGPENELLKPNGKDLPTLVNELKQELPV 276

  Fly   228 --NSIASSMYSSQTSLSSHTQ----PRDKLMASKGE----------GKPMEVYVSAVASPTKFWV 276
              |....|..:::.||.|..:    |...|..||.|          .:.:||||||..:|..||:
Zfish   277 TVNGYVDSTDTAENSLRSEDEEILSPVSPLEISKFEIPSPDLSFQPDEHLEVYVSASENPQHFWI 341

  Fly   277 QLIGPQSKKLDSMVQEMTSYY---SSAENRAKHVLTAPYVGQIVAAVFKFDEKWYRAEIVDIMPN 338
            |::|.:|.:||.:..||:.:|   ||.|:|.:.::    ||.||||.::....|.||.::.|:.:
Zfish   342 QILGVRSLQLDKLTAEMSRFYNGDSSQEHRVETII----VGDIVAAPYRDHGTWNRARVLGIVGS 402

  Fly   339 QYNPKEQVIDLYFVDYGDSEYISPADICELRTDFLTLRFQAVECFLANVKSTIQTEPITWPKSSI 403
                  .::|||:||:||:..:....:..:|:|||:|.|||:||.||.|:    .|...|.::::
Zfish   403 ------GLVDLYYVDFGDNGELPREHLRSMRSDFLSLPFQAIECSLAGVR----PEGEVWTEAAL 457

  Fly   404 AKFEELTEVAHWRKLIARVVTYKERPRATTAVSAAAKEGTPLPGVELFDPADNSELNIADLMITQ 468
            ..||.:|..|.|:.|:|::.:|..            .|.:..|.|:|:|.:....:::...:|..
Zfish   458 DDFERMTFCAEWKPLLAKLYSYSH------------SEISSWPSVKLYDNSQGKAVDLGKELIRL 510

  Fly   469 GFALP---------------------LDDSYPVRSR----------------------------- 483
            |.|:.                     |||.....|.                             
Zfish   511 GHAVSCEDEGNGLRGDWDESRSLQKMLDDMTGATSELSMSCISLSGSPWVNDQLESSSRLSSSIE 575

  Fly   484 ---------------------SSTPSSNSDSTIEEL-----------CVSNPVTPLTP------H 510
                                 .||||.|....:.::           ..||.:||.:|      .
Zfish   576 LERADVDQNSTFKLMSSYSLIHSTPSQNLSDLVSQILETSSSMQDPPVQSNSLTPASPLHQLEIS 640

  Fly   511 SPMSMSIDVDSITQAENEHLAQQLQHLQHKLNGNDIKNINPAK-------LTATDLENGNNNNAS 568
            |..|..::|:::|.|.:.........|.....|.:.|..:.|.       ...|..||..::|:|
Zfish   641 SSFSSPLNVETVTSALDSFTLNDEVFLGSHYYGRNEKTTSSASEETGSSYTLETHSENTESSNSS 705

  Fly   569  568
            Zfish   706  705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
papiNP_608657.1 KH_1 68..129 CDD:459630 10/72 (14%)
KH-I 140..209 CDD:469614 29/73 (40%)
Tudor_TDRD2 281..383 CDD:410483 36/104 (35%)
tdrkhXP_073773714.1 None

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