DRSC/TRiP Functional Genomics Resources

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Protein Alignment papi and vret

DIOPT Version :10

Sequence 1:NP_608657.1 Gene:papi / 33401 FlyBaseID:FBgn0031401 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_651092.1 Gene:vret / 42695 FlyBaseID:FBgn0263143 Length:691 Species:Drosophila melanogaster


Alignment Length:396 Identity:80/396 - (20%)
Similarity:135/396 - (34%) Gaps:121/396 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 DKDSGHKFCDISGVPDAVKAARALLIKEIERAPVVKV----------------ELQVPQRLASKI 151
            |:..|.|: ...|:|.:....|   |...|:..||.|                |:.:..:.|||:
  Fly   307 DEKVGRKY-PKPGLPPSGSKVR---ITAFEQTNVVYVRSADIQIDIAYYTVLTEVMMLGKDASKL 367

  Fly   152 NGRG--GELLQEIRSSSLAKLNIDLNGRNGKAKITIIGNQKQVNIARKMLDDQIEEDEELVRSME 214
            ....  |:::       |.|    ..|...:|.:..:.|.|::.:.  .:|....|..:|.|..|
  Fly   368 QSTPVCGQIV-------LYK----FEGHMSRAMVLNVDNIKEIYVV--FIDFGSVEVTQLERLYE 419

  Fly   215 -------------EVEQRREPRRSPTNSIASSMYSSQTSLSSHTQPRDK-LMASKGEGKPMEVYV 265
                         .|:.|..|||....:|...||....||..:.:...: ...|||    |:|.|
  Fly   420 CSSYLAGLTCYPVAVKLRGVPRRFVGPNIREVMYELDQSLVFNIKYSSREYDTSKG----MQVVV 480

  Fly   266 --------------SAVASPTKFWVQLIGPQ-----------SKKLDSMVQEMT------SYYSS 299
                          ..:.:|.:..|..:|.:           .|.::.:|.:.|      .|.:|
  Fly   481 MTEIDINRSLNRLFKTILTPVEPSVSDLGYKEDCLPYIPLHCGKNINVVVMDNTFIQCGFIYCTS 545

  Fly   300 -----------------AENRAKHVLTAPYVGQIVAAVFKFDEKWYRAEIVDIMPNQYNPKEQVI 347
                             .|..||....||.:.::..|  |::.||.|...|:::.:.|.      
  Fly   546 IDLAYEVTKMQRDIQEYGEKIAKCATYAPPINELCIA--KYEGKWRRGLSVELVGDGYP------ 602

  Fly   348 DLYFVDYGDSEYISPADICELR---TDFLTLRFQAVECFLANVKSTIQTEPITW-----PKSSIA 404
            .:.|:|||:   |.|..:.::|   ..|: ......:..|..|......|.|.|     |..|:.
  Fly   603 SILFIDYGN---IVPTHVTDIRPYPPQFI-FPIMTTQLDLIGVPEKPTDEQIKWLDKNYPIGSVI 663

  Fly   405 KFEELT 410
            ...|:|
  Fly   664 TCSEIT 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
papiNP_608657.1 KH_1 68..129 CDD:459630 6/25 (24%)
KH-I 140..209 CDD:469614 13/70 (19%)
Tudor_TDRD2 281..383 CDD:410483 25/138 (18%)
vretNP_651092.1 TUDOR 322..438 CDD:425754 23/131 (18%)
Tudor_vreteno-like_rpt1 371..424 CDD:410515 12/65 (18%)
TUDOR 524..640 CDD:425754 26/127 (20%)
Tudor_vreteno-like_rpt2 576..631 CDD:410516 15/66 (23%)

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