DRSC/TRiP Functional Genomics Resources

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Protein Alignment papi and Tdrd6

DIOPT Version :10

Sequence 1:NP_608657.1 Gene:papi / 33401 FlyBaseID:FBgn0031401 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001154838.1 Gene:Tdrd6 / 210510 MGIID:2679727 Length:2135 Species:Mus musculus


Alignment Length:570 Identity:124/570 - (21%)
Similarity:210/570 - (36%) Gaps:169/570 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 EEEADSGGQRPAS-GIRGQ------TEEQKPQKEVCLKIVVDNEHVPLIMGRGGSNIKLIEEKTL 96
            ||..|..|...|| |:.||      .|..:||:  |.:::    ||                   
Mouse   306 EESPDKPGSPCASCGLDGQWYRALLLETFRPQR--CAQVL----HV------------------- 345

  Fly    97 AKIRLRDKDSGHK---FCDISGVPDAVKAARALLIKEIERAPVVKVELQVPQRLASKIN-GRG-- 155
                    |.|.|   .|          ::...|:.|..|.|||    ..|..|....: |||  
Mouse   346 --------DYGRKELVSC----------SSLRYLLPEYFRMPVV----TYPCALYGLWDCGRGWS 388

  Fly   156 ----GELLQEIRSSSL-AKLN----------IDLNGRNGKAKITIIGNQKQVNIARKMLDDQ-IE 204
                |:|...|...:: ||:.          :.|.|.:|....:..|.| ...:|...|..| ||
Mouse   389 RSQVGDLKALILGQAVNAKIEFYCSFEHMYYVTLYGEDGINLNSAFGVQ-SCCLADWFLQSQGIE 452

  Fly   205 EDEELVRSMEEVEQRREPRRSPTNSIASSMYSSQTSLSSHTQPRDKLMASKGEGKPMEVYVSAVA 269
            |:||  ...:|||...: .:||...:     .::.||.|....|.|:...      .:..|..|.
Mouse   453 EEEE--EDEDEVEAAFQ-SQSPAEEM-----EAEVSLPSLRSIRLKMNTF------YDAQVEFVK 503

  Fly   270 SPTKFWVQLIGPQSKKLDSMVQEMTSYYSSAENRAKHVLTAPYVGQIVAAVFKFDEKWYRAEIVD 334
            ||::||::| .........:.:.|.|:|||| ::...|:..|....:....:| :..:|||.:..
Mouse   504 SPSEFWIRL-RKHKNTFSKLTKRMCSFYSSA-SKLDGVILRPEPDDLCCVKWK-ENGYYRATVTR 565

  Fly   335 IMPNQYNPKEQVIDLYFVDYGDSEYISPADICELRTDFLTLRFQAVECFLANVKSTIQTEPI--T 397
            :       ..:.:|::.||.|:||.:...|:..|...|..|...|::|.||::      .|:  |
Mouse   566 L-------DSKSVDVFLVDRGNSENVDWCDVRMLLPQFRQLPILALKCTLADI------WPLGKT 617

  Fly   398 WPKSSIAKFEELTEVAHWRKLIARVVTYKERPRATTAVSAAAKEGTPLPGVELFDPADNSELNIA 462
            |.:.:.:.|::  .|.| ::|:..|:..::....                :|:.|.:...|.||:
Mouse   618 WSQEATSFFKK--TVLH-KELVVHVLDKQDHQYV----------------IEILDESRMGEENIS 663

  Fly   463 DLMITQGFALPLDDSYPVRSRSSTPSSNSDSTIEELCVSNPVTPLTPHSP-------MSMSIDVD 520
            .::...|||                ......|.|.:       .|:.|||       |:....:.
Mouse   664 KVIAQAGFA----------------KFQEFETKENI-------RLSAHSPGHVSGHFMAEPSKIT 705

  Fly   521 SITQAENEHLAQQLQHLQHKLNGNDIKNINPAKLTATDLENGNNNNASTT 570
            |..:||.:..|::           |.|.::.::..|..:...|.:.|..|
Mouse   706 SAKKAEGDQRAKK-----------DNKTLSVSEALADTVSLSNLSTAQDT 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
papiNP_608657.1 KH_1 68..129 CDD:459630 7/63 (11%)
KH-I 140..209 CDD:469614 22/87 (25%)
Tudor_TDRD2 281..383 CDD:410483 23/101 (23%)
Tdrd6NP_001154838.1 Tudor_TDRD6_rpt1 6..136 CDD:410491
Tudor_TDRD6_rpt2 239..379 CDD:410492 27/119 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 287..315 4/8 (50%)
Tudor_SF 494..628 CDD:470623 37/155 (24%)
Tudor_SF 771..891 CDD:470623
Tudor_SF 980..1104 CDD:470623
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1271..1296
Tudor_SF 1312..1426 CDD:470623
Tudor_SF 1524..1666 CDD:470623
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1699..1733
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1860..1885
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1930..1985
Blue background indicates that the domain is not in the aligned region.

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