DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment APLP2 and Aplp2

DIOPT Version :9

Sequence 1:NP_001633.1 Gene:APLP2 / 334 HGNCID:598 Length:763 Species:Homo sapiens
Sequence 2:NP_001344627.1 Gene:Aplp2 / 11804 MGIID:88047 Length:763 Species:Mus musculus


Alignment Length:763 Identity:709/763 - (92%)
Similarity:736/763 - (96%) Gaps:0/763 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAATGTAAAAATGRLLLLLLVGLTAPALALAGYIEALAANAGTGFAVAEPQIAMFCGKLNMHVNI 65
            |||||||||||||:||:|||:||||||.|||||||||||||||||||||||||||||||||||||
Mouse     1 MAATGTAAAAATGKLLVLLLLGLTAPAAALAGYIEALAANAGTGFAVAEPQIAMFCGKLNMHVNI 65

Human    66 QTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITNVMEANQRVSIDNWCRRDKKQCKSRFVTP 130
            |||||||||||||||..|||||||||||:||||||||||||||.|:||:||||||:||||..|.|
Mouse    66 QTGKWEPDPTGTKSCLGTKEEVLQYCQEIYPELQITNVMEANQPVNIDSWCRRDKRQCKSHIVIP 130

Human   131 FKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVVKEACLTQGMTLYSYGMLLPCGVDQF 195
            ||||||||||||||||:.|||||:|||||||.||.|||:|||||||:|:||||||||||||||||
Mouse   131 FKCLVGEFVSDVLLVPDNCQFFHQERMEVCEKHQRWHTLVKEACLTEGLTLYSYGMLLPCGVDQF 195

Human   196 HGTEYVCCPQTKIIGSVSKEEEEEDEEEEEEEDEEEDYDVYKSEFPTEADLEDFTEAAVDEDDED 260
            ||||||||||||.:.|.|...:||:||||:|||||||||:.|||||||||||||||||.||::||
Mouse   196 HGTEYVCCPQTKTVDSDSTMSKEEEEEEEDEEDEEEDYDLDKSEFPTEADLEDFTEAAADEEEED 260

Human   261 EEEGEEVVEDRDYYYDTFKGDDYNEENPTEPGSDGTMSDKEITHDVKAVCSQEAMTGPCRAVMPR 325
            ||||||||||||||||.||||||||||||||.|:||:|||||.||||||||||||||||||||||
Mouse   261 EEEGEEVVEDRDYYYDPFKGDDYNEENPTEPSSEGTISDKEIVHDVKAVCSQEAMTGPCRAVMPR 325

Human   326 WYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKAMIPPTPLPTNDVDVYFETSADDNEHARF 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   326 WYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKAMIPPTPLPTNDVDVYFETSADDNEHARF 390

Human   391 QKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVET 455
            ||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Mouse   391 QKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKTERQTLIQHFQAMVKALEKEAASEKQQLVET 455

Human   456 HLARVEAMLNDRRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPE 520
            ||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   456 HLARVEAMLNDRRRIALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPE 520

Human   521 KAAQMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVD 585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||.|||
Mouse   521 KAAQMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTSSISENPVD 585

Human   586 VRVSSEESEEIPPFHPFHPFPALPENEDTQPELYHPMKKGSGVGEQDGGLIGAEEKVINSKNKVD 650
            ||||||||||||||||.||||:|.||||||||||||||||||:.|||||||||||||||||||:|
Mouse   586 VRVSSEESEEIPPFHPLHPFPSLSENEDTQPELYHPMKKGSGMAEQDGGLIGAEEKVINSKNKMD 650

Human   651 ENMVIDETLDVKEMIFNAERVGGLEEERESVGPLREDFSLSSSALIGLLVIAVAIATVIVISLVM 715
            |||||||||||||||||||||||||||.||||||||||||||:||||||||||||||||||||||
Mouse   651 ENMVIDETLDVKEMIFNAERVGGLEEEPESVGPLREDFSLSSNALIGLLVIAVAIATVIVISLVM 715

Human   716 LRKRQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI 763
            ||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   716 LRKRQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APLP2NP_001633.1 A4_EXTRA 42..204 CDD:128326 143/161 (89%)
GFLD subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU01217 46..139 82/92 (89%)
APP_N 49..147 CDD:280358 87/97 (90%)
CuBD subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU01217 147..205 49/57 (86%)
APP_Cu_bd 149..204 CDD:289676 48/54 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..299 71/87 (82%)
Kunitz_BPTI 309..361 CDD:278443 51/51 (100%)
APP_E2 365..547 CDD:289677 179/181 (99%)
APP_amyloid 709..759 CDD:287486 49/49 (100%)
Interaction with DAB2. /evidence=ECO:0000250 749..763 13/13 (100%)
NPXY motif 750..755 4/4 (100%)
Aplp2NP_001344627.1 A4_EXTRA 42..204 CDD:128326 143/161 (89%)
Kunitz_BPTI 309..361 CDD:278443 51/51 (100%)
APP_E2 365..547 CDD:315580 179/181 (99%)
APP_amyloid 709..759 CDD:313694 49/49 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83965132
Domainoid 1 1.000 359 1.000 Domainoid score I13015
eggNOG 1 0.900 - - E1_KOG4295
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20396
Inparanoid 1 1.050 1180 1.000 Inparanoid score I4523
Isobase 1 0.950 - 0 Normalized mean entropy S6881
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG50020
OrthoDB 1 1.010 - - D405630at33208
OrthoFinder 1 1.000 - - FOG0001588
OrthoInspector 1 1.000 - - oto121617
orthoMCL 1 0.900 - - OOG6_104222
Panther 1 1.100 - - LDO PTHR23103
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2378
SonicParanoid 1 1.000 - - X996
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1919.250

Return to query results.
Submit another query.