Sequence 1: | NP_608656.1 | Gene: | mio / 33399 | FlyBaseID: | FBgn0031399 | Length: | 867 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001167025.1 | Gene: | Mios / 362324 | RGDID: | 1308432 | Length: | 875 | Species: | Rattus norvegicus |
Alignment Length: | 936 | Identity: | 291/936 - (31%) |
---|---|---|---|
Similarity: | 460/936 - (49%) | Gaps: | 150/936 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSGNTHGLSWFPHFPDKFVSWGQEIHLYEVRRKDDH---------SQKSRLPYISVNYLANESRY 56
Fly 57 QYARCVAASYHSD-QPIIAVGLADGKVGICNFRDTYDSSW------EYTPRQQRMCTCLAWNELD 114
Fly 115 ANILAIGHDRHRNDTCITIWDI-----ERGVPKETANF-----------------FGVGESANSI 157
Fly 158 CW-DRNHRTVIAGMSQKMIKLFDLRQSNATCQSIQTKTVQGLSVSPN-GNYLCSYVDSVITLWDP 220
Fly 221 RNIKSP-LRQIQSSKNHLQIAWCPTRTSLLSSLQRDSSYITLYDIRSVDT--DNSGEIYHVKRQI 282
Fly 283 SPFPARYQHSGKFSFVNCLSWHSRDFERALLLADALNILDFRLPATLHTAHSNRRKLPLLMQRPL 347
Fly 348 YTPASPTSTAATPTQQQPTSSCSTNSGSSLDFSTPGGSPFNVDLLKPELFELDLVDETRQRALED 412
Fly 413 YGIKPDNKRFGELHL-----TPYLRNVWSTLN--NVYSEDR------------LTGLKATLGINL 458
Fly 459 GHTSEALMASSRIESQVLQWPEGINNSNKLICYRSEQRDLALQLCGW---AFEQELDRFIDQLYA 520
Fly 521 NKEYSRAAMICVFHLKIFHACNILSSAADNMRDPSMYRITVIALSSFNADRCSSTWRNQRSSANM 585
Fly 586 QIHDPHLRAVFSFLTMEKDNFDAVLKEEGVSLSDRMAFACKYLSETKLADYVAQQIQAAIDGGDL 650
Fly 651 NGLLLTGESQDGIDILQSYMDTSFDVQTVALVAINYFRQELFEDKRIQYWIASYLDHLNSWGLWE 715
Fly 716 KRAELDIKIESIRPSSRSSRTVFLSCNFCGKSVSNALLDEPRPR--------STTTSTNRLSSCP 772
Fly 773 SCRKPLPRCSLCLMHMGTMVNMSNG-----ETPTTTPDVPGWQTKPFSKWFSWCQTCRHGGHTEH 832
Fly 833 IMQWFKQNSECPVSSCNCRCFDMDGT 858 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
mio | NP_608656.1 | WD40 repeat | 8..44 | CDD:293791 | 12/44 (27%) |
WD40 | 60..>266 | CDD:295369 | 79/237 (33%) | ||
WD40 repeat | 60..101 | CDD:293791 | 13/47 (28%) | ||
WD40 | <65..266 | CDD:225201 | 76/232 (33%) | ||
WD40 repeat | 105..148 | CDD:293791 | 22/64 (34%) | ||
WD40 repeat | 155..188 | CDD:293791 | 11/33 (33%) | ||
WD40 repeat | 195..231 | CDD:293791 | 11/37 (30%) | ||
WD40 repeat | 236..284 | CDD:293791 | 20/49 (41%) | ||
Zn_ribbon_17 | 741..852 | CDD:305234 | 52/123 (42%) | ||
Mios | NP_001167025.1 | WD40 repeat | 64..105 | CDD:293791 | 11/40 (28%) |
WD40 | 112..>299 | CDD:421866 | 66/188 (35%) | ||
WD40 repeat | 116..176 | CDD:293791 | 22/59 (37%) | ||
WD40 repeat | 188..220 | CDD:293791 | 11/33 (33%) | ||
WD40 repeat | 227..264 | CDD:293791 | 11/36 (31%) | ||
WD40 repeat | 270..318 | CDD:293791 | 20/47 (43%) | ||
WD40 repeat | 325..347 | CDD:293791 | 3/21 (14%) | ||
mRING-H2-C3H3C2_Mio | 782..858 | CDD:319605 | 35/78 (45%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166338649 | |
Domainoid | 1 | 1.000 | 225 | 1.000 | Domainoid score | I2459 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1008 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H10371 | |
Inparanoid | 1 | 1.050 | 442 | 1.000 | Inparanoid score | I1602 |
OMA | 1 | 1.010 | - | - | QHG55445 | |
OrthoDB | 1 | 1.010 | - | - | D446979at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005795 | |
OrthoInspector | 1 | 1.000 | - | - | oto97183 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104395 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR16453 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X4772 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.770 |