Sequence 1: | NP_608656.1 | Gene: | mio / 33399 | FlyBaseID: | FBgn0031399 | Length: | 867 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001360031.1 | Gene: | F39C12.1 / 180759 | WormBaseID: | WBGene00018193 | Length: | 5115 | Species: | Caenorhabditis elegans |
Alignment Length: | 815 | Identity: | 162/815 - (19%) |
---|---|---|---|
Similarity: | 277/815 - (33%) | Gaps: | 248/815 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 169 GMSQKMIKLFDLRQSNATCQSIQTKTVQGLSVSPNGNYLCSYVDSVITLWDPRNIKSPLRQIQSS 233
Fly 234 KNHLQIAWCPTRTSLLSSLQRDSSYITLYDIRSVDTDNSGEIYHVKRQISPFPARYQHSGKFSFV 298
Fly 299 NCLSWHSRDFERALLLADALNILDFR-LPATLHTAHSNRRKLPLLMQR--PLYTPASPTSTAA-- 358
Fly 359 -TPTQQQPTSSCSTNSGSSLDFSTPGGSPFNVDLLK--PELFEL--------------DL----V 402
Fly 403 DETRQRALEDYGIKPDNKRFGELHLTPYLRNVWSTL--NNVYSEDRLTGLKATL--------GIN 457
Fly 458 LGH---TSEALMASSRIESQVLQWPEGINNSN------KLICYRSEQRDLALQ------------ 501
Fly 502 LCGWAFEQELDRFIDQLYANKEYSRAAMICVFHL-----------KIFHACNILSSA-------- 547
Fly 548 ADNMR----------DPSMYRITVIALSSFNADR---------CSSTWRNQRSSANMQ---IHDP 590
Fly 591 HLRAVFSFLTM-EKDNFDAVLKEEGVSLSDRMAFACKYLSETKLADYVA---QQIQAAIDGGDLN 651
Fly 652 --------------GLLLTG---ESQDGIDILQSYMDTSFDVQTVALVAINYFRQELFEDKRIQY 699
Fly 700 WIASYLDHLNSWGLWEKRAELDIKIESIRPSSRSSRTVFLSCNFCGKSVSNALLDEPRPRSTTTS 764
Fly 765 TNRLSSCPSCRKPLPRCSLCLM-----HMGTMVNMSNGETPTTTPDVPGWQTKPFSKWFSWCQTC 824
Fly 825 RHGGHTEHIMQWFKQNSECPVSSCNCRCFDMDGTK 859 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
mio | NP_608656.1 | WD40 repeat | 8..44 | CDD:293791 | |
WD40 | 60..>266 | CDD:295369 | 17/96 (18%) | ||
WD40 repeat | 60..101 | CDD:293791 | |||
WD40 | <65..266 | CDD:225201 | 17/96 (18%) | ||
WD40 repeat | 105..148 | CDD:293791 | |||
WD40 repeat | 155..188 | CDD:293791 | 4/18 (22%) | ||
WD40 repeat | 195..231 | CDD:293791 | 4/35 (11%) | ||
WD40 repeat | 236..284 | CDD:293791 | 4/47 (9%) | ||
Zn_ribbon_17 | 741..852 | CDD:305234 | 33/115 (29%) | ||
F39C12.1 | NP_001360031.1 | DedD | 2883..>2991 | CDD:225689 | |
PTZ00449 | <3020..3470 | CDD:185628 | |||
mRING-H2-C3H3C2_Mio | 4997..5060 | CDD:319605 | 27/78 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160158443 | |
Domainoid | 1 | 1.000 | 62 | 1.000 | Domainoid score | I6870 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1008 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0005795 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR16453 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1695 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
7 | 6.920 |