DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uch and Uchl3

DIOPT Version :10

Sequence 1:NP_476940.1 Gene:Uch / 33397 FlyBaseID:FBgn0010288 Length:227 Species:Drosophila melanogaster
Sequence 2:XP_063130639.1 Gene:Uchl3 / 498560 RGDID:1561196 Length:314 Species:Rattus norvegicus


Alignment Length:262 Identity:98/262 - (37%)
Similarity:134/262 - (51%) Gaps:67/262 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WTPLESNPEVLTKYIHKLGVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEKHRAEEH 68
            |.|||:||||..:::.:||:.|.|...||.|:|.:.|..:||||.|.:||||.:|.||..|.||.
  Rat     6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMEPELLSMVPRPVCAVLLLFPITEKYEVFRTEEE 70

  Fly    69 DRIKEVEEQHPEDLFYMRQFTHNACGTVALIHSVANNKE-VDIDRG-VLKDFLEKTASLSPEERG 131
            ::||...:.....:::|:|...|||||:.|||::||||: :..:.| .||.|||::.::|||||.
  Rat    71 EKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSALKKFLEESVAMSPEERA 135

  Fly   132 RALEKDEKFTADHEALAQEGQTNAA------------------------------NH-------- 158
            |.||..:.....||..|.||||.::                              ||        
  Rat   136 RHLENYDAIRVTHETSAHEGQTESSSPSSSQPHSSHCRTKASSLCHHASLPWVKRNHVGPAKATS 200

  Fly   159 ---------------------------EKVIHHFIALVNKEGTLYELDGRKSFPIKHGPTSEETF 196
                                       |||..||||||:.:|.||||||||.|||.||.||:||.
  Rat   201 PSLRLRRWRPFLRLPSLGLHAVAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGKTSDETL 265

  Fly   197 VK 198
            ::
  Rat   266 LE 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UchNP_476940.1 Peptidase_C12_UCH_L1_L3 4..222 CDD:187737 98/262 (37%)
Uchl3XP_063130639.1 None

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