DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uch and caly

DIOPT Version :10

Sequence 1:NP_476940.1 Gene:Uch / 33397 FlyBaseID:FBgn0010288 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_611096.1 Gene:caly / 36794 FlyBaseID:FBgn0262166 Length:471 Species:Drosophila melanogaster


Alignment Length:238 Identity:60/238 - (25%)
Similarity:101/238 - (42%) Gaps:28/238 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WTPLESNPEVLTKYIHKLGVSPAWSVTDVIGLEDDTLEWIPRPVKA---FILLFPCSETYEKHR- 64
            |..|||:|.:.|..:...|.... .|.:|..|:        :|:::   ||.||...|.....| 
  Fly    46 WLELESDPGLFTLLLKDFGCHDV-QVEEVYDLQ--------KPIESPYGFIFLFRWIEERRARRK 101

  Fly    65 -AEEHDRIKEVEEQHPEDLFYMRQFTHNACGTVALIHSVANNKEVDIDRG-VLKDFLEKTASLSP 127
             .|....|...:|:....:|:.:|...|:|.|.||:..:.|..|.::..| .|......|..:||
  Fly   102 IVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKTHTKGMSP 166

  Fly   128 EERGRALEKDEKFTADHEA---------LAQEGQ-TNAANHEKVIHHFIALVNKEGTLYELDGRK 182
            |.:|.|:....:....|.:         |.:.|. .::........||::.|...|.|:||||.|
  Fly   167 ENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSFVPINGQLFELDGLK 231

  Fly   183 SFPIKHGPTSE-ETFVKDAAKVCKEFM--ARDPNEVRFTVLAL 222
            .:|:.||...: |.:.....:|..|.:  |....::||.::|:
  Fly   232 PYPMNHGGWEDSEDWTDKFRRVMAERLGIATGEQDIRFNLMAV 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UchNP_476940.1 Peptidase_C12_UCH_L1_L3 4..222 CDD:187737 59/236 (25%)
calyNP_611096.1 Peptidase_C12_UCH37_BAP1 46..274 CDD:187738 59/236 (25%)
UCH_C 348..393 CDD:465622
Blue background indicates that the domain is not in the aligned region.

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