DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uch and uch1

DIOPT Version :9

Sequence 1:NP_001188681.1 Gene:Uch / 33397 FlyBaseID:FBgn0010288 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_594531.1 Gene:uch1 / 2541733 PomBaseID:SPAC27F1.03c Length:222 Species:Schizosaccharomyces pombe


Alignment Length:232 Identity:73/232 - (31%)
Similarity:113/232 - (48%) Gaps:25/232 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WTPLESNPEVLTKYIHKLGVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSET---YEKHRA 65
            |.|||:.||||..|:.|:||..| ||.|:..|| :..|:|||||.|.:.:||.|.|   |:..|.
pombe     2 WRPLENTPEVLEPYLQKIGVQDA-SVFDLFSLE-EIPEYIPRPVHALLFVFPSSGTKTIYKGSRI 64

  Fly    66 EEHDRIKEVEEQHPEDLFYMRQFTHNACGTVALIHSVAN---NKEVDIDRGVLKDFLEKTASLSP 127
            ...|..|         :.:..|...|||||:.|:|:|:|   .::|: :...:|..:......|.
pombe    65 LPKDSDK---------VLWYPQTIPNACGTIGLLHAVSNGELRRKVN-ENDFIKSLIRTAEGSSI 119

  Fly   128 EERGRALEKDEKFTADHEALAQEGQTNAANHEKVIH--HFIALV----NKEGTLYELDGRKSFPI 186
            |||.:.:|..::..|.|.|.|........:.|.|..  |||..|    ..:...||||||:..|:
pombe   120 EERAKLIEDSKELEALHAAFAGPPLEVEGSEEDVETDLHFICFVKGKSKDDNHFYELDGRQEGPV 184

  Fly   187 KHGPTSEETFVKDAAKVCKEFMARDPNEVRFTVLALT 223
            :|.....:....:...|.|.:: :..:...|:::|:|
pombe   185 QHSEIESDLLNAEVLSVIKNYI-QSIDSPFFSLVAIT 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UchNP_001188681.1 Peptidase_C12_UCH_L1_L3 4..222 CDD:187737 71/229 (31%)
uch1NP_594531.1 Peptidase_C12_UCH_L1_L3 2..219 CDD:187737 71/229 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 96 1.000 Domainoid score I1923
eggNOG 1 0.900 - - E1_KOG1415
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53971
OrthoFinder 1 1.000 - - FOG0001664
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101218
Panther 1 1.100 - - LDO PTHR10589
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1588
SonicParanoid 1 1.000 - - X1061
TreeFam 1 0.960 - -
1110.810

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