DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uch and ubh-2

DIOPT Version :9

Sequence 1:NP_001188681.1 Gene:Uch / 33397 FlyBaseID:FBgn0010288 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_001294721.2 Gene:ubh-2 / 24105081 WormBaseID:WBGene00006722 Length:227 Species:Caenorhabditis elegans


Alignment Length:222 Identity:77/222 - (34%)
Similarity:118/222 - (53%) Gaps:8/222 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WTPLESNPEVLTKYIHKLGVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEKHRAEEH 68
            |..||||||.:..::.|:|||....| ||...:|:.|::||.|..|.||.||.|...| .||:::
 Worm     8 WQALESNPETINPFLSKIGVSGVECV-DVFSFDDEMLQFIPTPQLALILCFPSSGVRE-FRAKQY 70

  Fly    69 DRIKEVEEQHPEDLFYMRQFTH--NACGTVALIHSVAN-NKEVDIDRGVLKDFLEKTASLSPEER 130
            :.: |...:.|:.:|:|.|...  :||||.:|.||:|| ...|::..|....:.||...:...||
 Worm    71 EEV-EKNGKKPDGIFFMNQKKEIGHACGTFSLFHSLANLENRVNLGNGKFSKWFEKAKLVGEGER 134

  Fly   131 GRALEKDEKFTADHEALAQEGQTNAANHEKVIHHFIALVNKEGTLYELDGRKSFPIKHGPTSEET 195
            ...|..|......|:..|:||:|....|  |.:|||..|||.|.|:|:|....||...|.|::.|
 Worm   135 SDLLLADTDLAEAHKETAEEGETEHPEH--VAYHFITYVNKNGQLFEIDSCSPFPRPLGATTDST 197

  Fly   196 FVKDAAKVCKEFMARDPNEVRFTVLAL 222
            .::||.....:.:..:..::.|:.:||
 Worm   198 MIRDAFSTSIKDLMDNVQKLSFSAMAL 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UchNP_001188681.1 Peptidase_C12_UCH_L1_L3 4..222 CDD:187737 75/220 (34%)
ubh-2NP_001294721.2 Peptidase_C12_UCH_L1_L3 8..224 CDD:187737 75/220 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156490
Domainoid 1 1.000 136 1.000 Domainoid score I3054
eggNOG 1 0.900 - - E1_KOG1415
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I3093
Isobase 1 0.950 - 0 Normalized mean entropy S1557
OMA 1 1.010 - - QHG53971
OrthoDB 1 1.010 - - D1013351at2759
OrthoFinder 1 1.000 - - FOG0001664
OrthoInspector 1 1.000 - - otm14163
orthoMCL 1 0.900 - - OOG6_101218
Panther 1 1.100 - - O PTHR10589
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1588
SonicParanoid 1 1.000 - - X1061
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.750

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