DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uch and ubh-1

DIOPT Version :9

Sequence 1:NP_001188681.1 Gene:Uch / 33397 FlyBaseID:FBgn0010288 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_504654.1 Gene:ubh-1 / 179039 WormBaseID:WBGene00006721 Length:216 Species:Caenorhabditis elegans


Alignment Length:223 Identity:85/223 - (38%)
Similarity:123/223 - (55%) Gaps:18/223 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WTPLESNPEVLTKYIHKLGVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEKHRAEEH 68
            ||||||||.|:...|.|:|||...:| ||:..:|::   |.:|..|.||.||   .|:|    ..
 Worm     5 WTPLESNPSVINPMIEKMGVSGVKTV-DVLFFDDES---IGKPQHAVILCFP---EYKK----VD 58

  Fly    69 DRIKEVEEQ---HPEDLFYMRQFTHNACGTVALIHSVANNKE-VDIDRGVLKDFLEKTASLSPEE 129
            :.:|.:.||   ..:.:|:|:|...|||||.||.||:||.:: :::..|....:|.:...:..||
 Worm    59 EIMKPIYEQAKAADDSVFFMKQKISNACGTFALFHSLANLEDRINLGDGSFAKWLAEAKKVGIEE 123

  Fly   130 RGRALEKDEKFTADHEALAQEGQTNAANHEKVIHHFIALVNKEGTLYELDGRKSFPIKHGPTSEE 194
            |...|..:.:....|.|.|.:|||  |....|.||||..|.|.|.|||:|.|:.|..:.||||:.
 Worm   124 RSDFLANNAELAGIHAAAATDGQT--APSGDVEHHFICFVGKNGILYEIDSRRPFAREIGPTSDA 186

  Fly   195 TFVKDAAKVCKEFMARDPNEVRFTVLAL 222
            |.||||...|:..:.:..| |.|:.:|:
 Worm   187 TLVKDAGAACQHLIEKLDN-VSFSAIAV 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UchNP_001188681.1 Peptidase_C12_UCH_L1_L3 4..222 CDD:187737 84/221 (38%)
ubh-1NP_504654.1 Peptidase_C12_UCH_L1_L3 5..212 CDD:187737 84/220 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156492
Domainoid 1 1.000 136 1.000 Domainoid score I3054
eggNOG 1 0.900 - - E1_KOG1415
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I3093
Isobase 1 0.950 - 0 Normalized mean entropy S1557
OMA 1 1.010 - - QHG53971
OrthoDB 1 1.010 - - D1013351at2759
OrthoFinder 1 1.000 - - FOG0001664
OrthoInspector 1 1.000 - - otm14163
orthoMCL 1 0.900 - - OOG6_101218
Panther 1 1.100 - - LDO PTHR10589
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1588
SonicParanoid 1 1.000 - - X1061
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.750

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